31 items (Opisthocomus hoazin) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N306_14587	DNA-directed RNA polymerase III subunit RPC5. (684 aa)
	N306_15384	DNA-directed RNA polymerase III subunit RPC7. (212 aa)
	N306_02448	Nuclear factor 1 A-type. (332 aa)
	N306_13162	Transcription factor TFIIIB component B. (343 aa)
	N306_05160	TATA-box-binding protein. (194 aa)
	N306_10454	DNA-directed RNA polymerase III subunit RPC9. (66 aa)
	N306_13712	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1387 aa)
	N306_05639	DNA-directed RNA polymerases I, II, and III subunit RPABC4. (55 aa)
	N306_11305	General transcription factor 3C polypeptide 6. (198 aa)
	N306_02199	TATA-box-binding protein. (304 aa)
	N306_07380	DNA-directed RNA polymerase III subunit RPC8. (206 aa)
	N306_04068	Lupus La protein. (406 aa)
	N306_09717	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (553 aa)
	N306_09709	snRNA-activating protein complex subunit 3. (307 aa)
	N306_07698	Zinc finger protein 143. (637 aa)
	N306_08911	DNA-directed RNA polymerases I and III subunit RPAC1. (264 aa)
	N306_14928	TATA box-binding protein-like 1. (183 aa)
	N306_05132	DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
	N306_06428	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1100 aa)
	N306_14752	General transcription factor 3C polypeptide 4. (697 aa)
	N306_14745	General transcription factor 3C polypeptide 5. (467 aa)
	N306_10730	Microtubule-associated protein 1A. (156 aa)
	N306_11336	Transcription factor IIIB 90 kDa subunit. (536 aa)
	N306_09159	Transcription factor IIIA. (292 aa)
	N306_11335	Uncharacterized protein. (57 aa)
	N306_02289	snRNA-activating protein complex subunit 4. (1316 aa)
	N306_05834	DNA-directed RNA polymerases I, II, and III subunit RPABC3. (102 aa)
	N306_12193	snRNA-activating protein complex subunit 1. (316 aa)
	N306_12843	DNA-directed RNA polymerase III subunit RPC6. (296 aa)
	N306_00925	DNA-directed RNA polymerases I, II, and III subunit RPABC2. (95 aa)
	N306_03276	DNA-directed RNA polymerase III subunit RPC3. (52 aa)

Your Current Organism:

Opisthocomus hoazin

NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N306_00925	N306_02199	A0A091XJD4	A0A091W8B4	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	TATA-box-binding protein.	0.934
N306_00925	N306_02289	A0A091XJD4	A0A091WMM2	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	snRNA-activating protein complex subunit 4.	0.549
N306_00925	N306_03276	A0A091XJD4	A0A091XFD7	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	DNA-directed RNA polymerase III subunit RPC3.	0.996
N306_00925	N306_05132	A0A091XJD4	A0A091VT23	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	DNA-directed RNA polymerases I, II, and III subunit RPABC5.	0.999
N306_00925	N306_05160	A0A091XJD4	A0A091WID5	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	TATA-box-binding protein.	0.934
N306_00925	N306_05639	A0A091XJD4	A0A091WD55	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	0.999
N306_00925	N306_05834	A0A091XJD4	A0A091WLA5	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	DNA-directed RNA polymerases I, II, and III subunit RPABC3.	0.999
N306_00925	N306_06428	A0A091XJD4	A0A091VF61	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
N306_00925	N306_07380	A0A091XJD4	A0A091W6F1	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	DNA-directed RNA polymerase III subunit RPC8.	0.998
N306_00925	N306_07698	A0A091XJD4	A0A091W4N6	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	Zinc finger protein 143.	0.511
N306_00925	N306_08911	A0A091XJD4	A0A091W4I7	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	DNA-directed RNA polymerases I and III subunit RPAC1.	0.999
N306_00925	N306_09159	A0A091XJD4	A0A091WPB8	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	Transcription factor IIIA.	0.582
N306_00925	N306_09709	A0A091XJD4	A0A091W4P3	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	snRNA-activating protein complex subunit 3.	0.838
N306_00925	N306_10454	A0A091XJD4	A0A091WFN6	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	DNA-directed RNA polymerase III subunit RPC9.	0.993
N306_00925	N306_10730	A0A091XJD4	A0A091WRA1	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	Microtubule-associated protein 1A.	0.864
N306_00925	N306_11335	A0A091XJD4	A0A091WNH0	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	Uncharacterized protein.	0.849
N306_00925	N306_11336	A0A091XJD4	A0A091WQM8	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	Transcription factor IIIB 90 kDa subunit.	0.897
N306_00925	N306_12843	A0A091XJD4	A0A091WJD4	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	DNA-directed RNA polymerase III subunit RPC6.	0.997
N306_00925	N306_13162	A0A091XJD4	A0A091WIY5	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	Transcription factor TFIIIB component B.	0.918
N306_00925	N306_13712	A0A091XJD4	A0A091WFC5	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999