12 items (Opisthocomus hoazin) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N306_07628	Histone RNA hairpin-binding protein. (216 aa)
	N306_01091	Small nuclear ribonucleoprotein-associated protein B. (243 aa)
	N306_04234	Small nuclear ribonucleoprotein F. (53 aa)
	N306_08695	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (108 aa)
	N306_15208	Small nuclear ribonucleoprotein G. (60 aa)
	N306_07629	Histone RNA hairpin-binding protein. (191 aa)
	N306_13577	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (57 aa)
	N306_03583	U7 snRNA-associated Sm-like LSm11. (215 aa)
	N306_11756	Nuclear cap-binding protein subunit 1. (754 aa)
	N306_05727	Ankyrin repeat domain-containing protein 9. (272 aa)
	N306_11981	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (65 aa)
	N306_04881	Small nuclear ribonucleoprotein Sm D3. (126 aa)

Your Current Organism:

Opisthocomus hoazin

NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N306_01091	N306_03583	A0A091WFY9	A0A091WMX5	Small nuclear ribonucleoprotein-associated protein B.	U7 snRNA-associated Sm-like LSm11.	0.865
N306_01091	N306_04234	A0A091WFY9	A0A091WJN6	Small nuclear ribonucleoprotein-associated protein B.	Small nuclear ribonucleoprotein F.	0.999
N306_01091	N306_04881	A0A091WFY9	A0A091W481	Small nuclear ribonucleoprotein-associated protein B.	Small nuclear ribonucleoprotein Sm D3.	0.999
N306_01091	N306_07628	A0A091WFY9	A0A091W6X0	Small nuclear ribonucleoprotein-associated protein B.	Histone RNA hairpin-binding protein.	0.561
N306_01091	N306_07629	A0A091WFY9	A0A091XC09	Small nuclear ribonucleoprotein-associated protein B.	Histone RNA hairpin-binding protein.	0.561
N306_01091	N306_08695	A0A091WFY9	A0A091WKL9	Small nuclear ribonucleoprotein-associated protein B.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.930
N306_01091	N306_11756	A0A091WFY9	A0A091WMS4	Small nuclear ribonucleoprotein-associated protein B.	Nuclear cap-binding protein subunit 1.	0.996
N306_01091	N306_11981	A0A091WFY9	A0A091W1Q6	Small nuclear ribonucleoprotein-associated protein B.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
N306_01091	N306_13577	A0A091WFY9	A0A091WPL3	Small nuclear ribonucleoprotein-associated protein B.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.930
N306_01091	N306_15208	A0A091WFY9	A0A091XJY4	Small nuclear ribonucleoprotein-associated protein B.	Small nuclear ribonucleoprotein G.	0.999
N306_03583	N306_01091	A0A091WMX5	A0A091WFY9	U7 snRNA-associated Sm-like LSm11.	Small nuclear ribonucleoprotein-associated protein B.	0.865
N306_03583	N306_04234	A0A091WMX5	A0A091WJN6	U7 snRNA-associated Sm-like LSm11.	Small nuclear ribonucleoprotein F.	0.943
N306_03583	N306_04881	A0A091WMX5	A0A091W481	U7 snRNA-associated Sm-like LSm11.	Small nuclear ribonucleoprotein Sm D3.	0.941
N306_03583	N306_07628	A0A091WMX5	A0A091W6X0	U7 snRNA-associated Sm-like LSm11.	Histone RNA hairpin-binding protein.	0.742
N306_03583	N306_07629	A0A091WMX5	A0A091XC09	U7 snRNA-associated Sm-like LSm11.	Histone RNA hairpin-binding protein.	0.694
N306_03583	N306_11756	A0A091WMX5	A0A091WMS4	U7 snRNA-associated Sm-like LSm11.	Nuclear cap-binding protein subunit 1.	0.623
N306_03583	N306_11981	A0A091WMX5	A0A091W1Q6	U7 snRNA-associated Sm-like LSm11.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.946
N306_03583	N306_15208	A0A091WMX5	A0A091XJY4	U7 snRNA-associated Sm-like LSm11.	Small nuclear ribonucleoprotein G.	0.938
N306_04234	N306_01091	A0A091WJN6	A0A091WFY9	Small nuclear ribonucleoprotein F.	Small nuclear ribonucleoprotein-associated protein B.	0.999
N306_04234	N306_03583	A0A091WJN6	A0A091WMX5	Small nuclear ribonucleoprotein F.	U7 snRNA-associated Sm-like LSm11.	0.943