31 items (Opisthocomus hoazin) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N306_01882	Caspase-1; Belongs to the peptidase C14A family. (269 aa)
	N306_01874	C-C motif chemokine. (90 aa)
	N306_11880	Cyclic GMP-AMP synthase. (304 aa)
	N306_12961	Proto-oncogene c-Rel. (591 aa)
	N306_00925	DNA-directed RNA polymerases I, II, and III subunit RPABC2. (95 aa)
	N306_03276	DNA-directed RNA polymerase III subunit RPC3. (52 aa)
	N306_14587	DNA-directed RNA polymerase III subunit RPC5. (684 aa)
	N306_15384	DNA-directed RNA polymerase III subunit RPC7. (212 aa)
	N306_02964	Interferon alpha-2. (182 aa)
	N306_05834	DNA-directed RNA polymerases I, II, and III subunit RPABC3. (102 aa)
	N306_12843	DNA-directed RNA polymerase III subunit RPC6. (296 aa)
	N306_01873	C-C motif chemokine. (84 aa)
	N306_13712	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1387 aa)
	N306_12042	DNA-directed RNA polymerases I and III subunit RPAC2. (96 aa)
	N306_11670	Inhibitor of nuclear factor kappa-B kinase subunit beta. (686 aa)
	N306_05639	DNA-directed RNA polymerases I, II, and III subunit RPABC4. (55 aa)
	N306_02886	Nuclear factor NF-kappa-B p105 subunit. (971 aa)
	N306_12300	Inhibitor of nuclear factor kappa-B kinase subunit alpha. (686 aa)
	N306_07380	DNA-directed RNA polymerase III subunit RPC8. (206 aa)
	N306_08911	DNA-directed RNA polymerases I and III subunit RPAC1. (264 aa)
	N306_01567	Stimulator of interferon genes protein. (383 aa)
	N306_04391	Serine/threonine-protein kinase TBK1. (716 aa)
	N306_05132	DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
	N306_04514	Interleukin-6. (113 aa)
	N306_01931	Interleukin-18. (191 aa)
	N306_10576	NF-kappa-B inhibitor alpha. (203 aa)
	N306_06428	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1100 aa)
	N306_13165	Putative ATP-dependent RNA helicase DDX58. (841 aa)
	N306_01883	Caspase-1; Belongs to the peptidase C14A family. (264 aa)
	N306_01875	C-C motif chemokine. (65 aa)
	N306_00782	Receptor-interacting serine/threonine-protein kinase 1. (666 aa)

Your Current Organism:

Opisthocomus hoazin

NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N306_00782	N306_01567	A0A091VBT4	A0A091W3J6	Receptor-interacting serine/threonine-protein kinase 1.	Stimulator of interferon genes protein.	0.402
N306_00782	N306_01882	A0A091VBT4	A0A091VBD9	Receptor-interacting serine/threonine-protein kinase 1.	Caspase-1; Belongs to the peptidase C14A family.	0.472
N306_00782	N306_01883	A0A091VBT4	A0A091VDZ7	Receptor-interacting serine/threonine-protein kinase 1.	Caspase-1; Belongs to the peptidase C14A family.	0.472
N306_00782	N306_02886	A0A091VBT4	A0A091WCY9	Receptor-interacting serine/threonine-protein kinase 1.	Nuclear factor NF-kappa-B p105 subunit.	0.437
N306_00782	N306_04391	A0A091VBT4	A0A091VVT2	Receptor-interacting serine/threonine-protein kinase 1.	Serine/threonine-protein kinase TBK1.	0.806
N306_00782	N306_10576	A0A091VBT4	A0A091VGW5	Receptor-interacting serine/threonine-protein kinase 1.	NF-kappa-B inhibitor alpha.	0.441
N306_00782	N306_11670	A0A091VBT4	A0A091WE78	Receptor-interacting serine/threonine-protein kinase 1.	Inhibitor of nuclear factor kappa-B kinase subunit beta.	0.905
N306_00782	N306_12300	A0A091VBT4	A0A091W8U2	Receptor-interacting serine/threonine-protein kinase 1.	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	0.933
N306_00782	N306_13165	A0A091VBT4	A0A091VEJ7	Receptor-interacting serine/threonine-protein kinase 1.	Putative ATP-dependent RNA helicase DDX58.	0.633
N306_00925	N306_03276	A0A091XJD4	A0A091XFD7	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	DNA-directed RNA polymerase III subunit RPC3.	0.996
N306_00925	N306_05132	A0A091XJD4	A0A091VT23	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	DNA-directed RNA polymerases I, II, and III subunit RPABC5.	0.999
N306_00925	N306_05639	A0A091XJD4	A0A091WD55	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	0.999
N306_00925	N306_05834	A0A091XJD4	A0A091WLA5	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	DNA-directed RNA polymerases I, II, and III subunit RPABC3.	0.999
N306_00925	N306_06428	A0A091XJD4	A0A091VF61	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
N306_00925	N306_07380	A0A091XJD4	A0A091W6F1	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	DNA-directed RNA polymerase III subunit RPC8.	0.998
N306_00925	N306_08911	A0A091XJD4	A0A091W4I7	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	DNA-directed RNA polymerases I and III subunit RPAC1.	0.999
N306_00925	N306_12042	A0A091XJD4	A0A091WF37	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	DNA-directed RNA polymerases I and III subunit RPAC2.	0.999
N306_00925	N306_12843	A0A091XJD4	A0A091WJD4	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	DNA-directed RNA polymerase III subunit RPC6.	0.997
N306_00925	N306_13712	A0A091XJD4	A0A091WFC5	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
N306_00925	N306_14587	A0A091XJD4	A0A091XAF7	DNA-directed RNA polymerases I, II, and III subunit RPABC2.	DNA-directed RNA polymerase III subunit RPC5.	0.994