STRINGSTRING
MCP_0385 MCP_0385 MCP_0939 MCP_0939 hisC hisC MCP_1007 MCP_1007 MCP_1113 MCP_1113 MCP_1189 MCP_1189 MCP_1192 MCP_1192 MCP_1193 MCP_1193 aspC-1 aspC-1 MCP_1725 MCP_1725 MCP_2000 MCP_2000
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MCP_0385Conserved hypothetical protein; Contains one Rieske [2Fe-2S] regiondomain (IPR005806). (103 aa)
MCP_0939Putative amidase. (461 aa)
hisCHistidinol-phosphate aminotransferase. (363 aa)
MCP_1007Conserved hypothetical protein. (424 aa)
MCP_1113Putative aspartate aminotransferase. (369 aa)
MCP_1189Phenylacetate-coenzyme A ligase. (418 aa)
MCP_1192Phenylacetate-coenzyme A ligase. (433 aa)
MCP_1193Phenylacetate-coenzyme A ligase. (433 aa)
aspC-1Aspartate aminotransferase. (375 aa)
MCP_1725Putative phenylacetate-coenzyme A ligase. (457 aa)
MCP_2000Phenylacetic acid degradation-related protein. (135 aa)
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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