STRINGSTRING
GOSR1 GOSR1 TRAPPC2 TRAPPC2 STX4 STX4 NAPG NAPG TRAPPC8 TRAPPC8 TBC1D25 TBC1D25 STX5 STX5 VPS51 VPS51 GORASP1 GORASP1 SURF4 SURF4 COPG1 COPG1 LMAN1 LMAN1 RAB1B RAB1B SEC16A SEC16A COG4 COG4 CCDC186 CCDC186 VPS52 VPS52 KDELR3 KDELR3 PLEKHA1 PLEKHA1 GBF1 GBF1 STX8 STX8 SEC22C SEC22C TMED3 TMED3 A0A4W2C903 A0A4W2C903 LCA5 LCA5 VPS54 VPS54 TRAPPC2L TRAPPC2L ARCN1 ARCN1 TRAPPC13 TRAPPC13 RAB1A RAB1A BNIP1 BNIP1 TMED2 TMED2 COG8 COG8 VTI1A VTI1A TRAPPC11 TRAPPC11 TRAPPC6A TRAPPC6A STX3 STX3 TRIM67 TRIM67 ARFIP1 ARFIP1 SEC31B SEC31B A0A4W2CKS2 A0A4W2CKS2 RAB36 RAB36 NAPA NAPA SEC23IP SEC23IP KDELR1 KDELR1 GDI2 GDI2 A0A4W2CN27 A0A4W2CN27 VAMP2 VAMP2 TRAPPC1 TRAPPC1 RAB18 RAB18 VAMP4 VAMP4 KDELR2 KDELR2 ARF5 ARF5 RAB3IP RAB3IP RAB3GAP2 RAB3GAP2 COPG2 COPG2 TSGA13 TSGA13 RIC1 RIC1 KDM4C KDM4C SCFD1 SCFD1 LYZL6 LYZL6 SNAP25 SNAP25 GOLGA3 GOLGA3 RABEPK RABEPK PREB PREB A0A4W2CYK1 A0A4W2CYK1 NBAS NBAS PLIN3 PLIN3 SEC22A SEC22A RAB19 RAB19 A0A4W2D4F7 A0A4W2D4F7 SEC23B SEC23B ARFGAP2 ARFGAP2 TRAPPC12 TRAPPC12 BET1 BET1 RASL12 RASL12 SEC31A SEC31A CCDC185 CCDC185 TBC1D20 TBC1D20 RAB6B RAB6B SNAP47 SNAP47 RAB3GAP1 RAB3GAP1 SEC24A SEC24A CERS1 CERS1 SEC24B SEC24B STX18 STX18 RAB43 RAB43 ARF4 ARF4 LOC113901678 LOC113901678 STX1A STX1A RAB34 RAB34 TMF1 TMF1 COPZ2 COPZ2 USE1 USE1 RABL6 RABL6 ARL5A ARL5A A0A4W2DYK7 A0A4W2DYK7 SEC23A SEC23A ARFGAP3 ARFGAP3 VAMP5 VAMP5 A0A4W2E2Q1 A0A4W2E2Q1 TRAPPC3L TRAPPC3L GCC2 GCC2 A0A4W2E520 A0A4W2E520 TRAPPC9 TRAPPC9 COG1 COG1 STX1B STX1B SEC16B SEC16B GOLGA4 GOLGA4 NSF NSF A0A4W2EB55 A0A4W2EB55 SEC24C SEC24C CHML CHML STX16 STX16 USP6NL USP6NL CCDC138 CCDC138 A0A4W2EDS0 A0A4W2EDS0 COPB1 COPB1 RGP1 RGP1 YKT6 YKT6 ARFGAP1 ARFGAP1 STX11 STX11 ACBD3 ACBD3 SNAP23 SNAP23 GAREM2 GAREM2 GOLGB1 GOLGB1 STXBP2 STXBP2 A0A4W2EPT3 A0A4W2EPT3 TMED10 TMED10 COG2 COG2 RABGGTA RABGGTA A0A4W2EU02 A0A4W2EU02 A0A4W2EW97 A0A4W2EW97 TRAPPC3 TRAPPC3 STX17 STX17 SMIM7 SMIM7 COPA COPA FILIP1L FILIP1L RINT1 RINT1 COG5 COG5 VTI1B VTI1B A0A4W2F9D6 A0A4W2F9D6 SAR1B SAR1B NAPB NAPB VAMP8 VAMP8 STXBP3 STXBP3 COPZ1 COPZ1 GOLGA2 GOLGA2 SNAP29 SNAP29 STXBP1 STXBP1 SAR1A SAR1A GOLGA1 GOLGA1 ARFRP1 ARFRP1 COG6 COG6 COG7 COG7 CCDC70 CCDC70 RABGAP1 RABGAP1 COG3 COG3 SEC22B SEC22B ZW10 ZW10 RAB24 RAB24 RABGGTB RABGGTB TRAPPC6B TRAPPC6B LOC113895523 LOC113895523 TRAPPC4 TRAPPC4 RAB6A RAB6A SEC24D SEC24D A0A4W2H6V9 A0A4W2H6V9 STX6 STX6 EIPR1 EIPR1 BET1L BET1L RAB9A RAB9A RAB33B RAB33B STX12 STX12 ANKRD40CL ANKRD40CL RABL3 RABL3 VPS50 VPS50 VPS53 VPS53 SYS1 SYS1 STX2 STX2 STX19 STX19 RAB39A RAB39A ARL1 ARL1 TRAPPC10 TRAPPC10 STX10 STX10 TMED9 TMED9 USO1 USO1 STX7 STX7 COPB2 COPB2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GOSR1Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (250 aa)
TRAPPC2Trafficking protein particle complex 2B. (140 aa)
STX4Syntaxin 4; Belongs to the syntaxin family. (447 aa)
NAPGNSF attachment protein gamma. (316 aa)
TRAPPC8Trafficking protein particle complex 8. (1440 aa)
TBC1D25TBC1 domain family member 25. (735 aa)
STX5Syntaxin 5; Belongs to the syntaxin family. (355 aa)
VPS51VPS51 subunit of GARP complex. (781 aa)
GORASP1Golgi reassembly stacking protein 1. (442 aa)
SURF4Surfeit 4. (269 aa)
COPG1Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (874 aa)
LMAN1Lectin, mannose binding 1. (568 aa)
RAB1BRAB1B, member RAS oncogene family. (201 aa)
SEC16AProtein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. (2308 aa)
COG4Component of oligomeric golgi complex 4. (789 aa)
CCDC186Coiled-coil domain containing 186. (899 aa)
VPS52VPS52 subunit of GARP complex. (701 aa)
KDELR3ER lumen protein-retaining receptor. (218 aa)
PLEKHA1Pleckstrin homology domain containing A1. (404 aa)
GBF1Golgi brefeldin A resistant guanine nucleotide exchange factor 1. (1890 aa)
STX8Syntaxin 8. (369 aa)
SEC22CSEC22 homolog C, vesicle trafficking protein; Belongs to the synaptobrevin family. (303 aa)
TMED3Transmembrane p24 trafficking protein 3. (254 aa)
A0A4W2C903V-SNARE coiled-coil homology domain-containing protein. (228 aa)
LCA5Lebercilin LCA5. (684 aa)
VPS54VPS54 subunit of GARP complex. (1015 aa)
TRAPPC2LTrafficking protein particle complex 2 like. (139 aa)
ARCN1Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (511 aa)
TRAPPC13Trafficking protein particle complex 13. (417 aa)
RAB1ARAB1A, member RAS oncogene family. (205 aa)
BNIP1BCL2 interacting protein 1. (228 aa)
TMED2GOLD domain-containing protein. (201 aa)
COG8Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family. (626 aa)
VTI1AVesicle transport through interaction with t-SNAREs 1A. (224 aa)
TRAPPC11Trafficking protein particle complex 11. (1133 aa)
TRAPPC6AUncharacterized protein. (269 aa)
STX3Syntaxin 3; Belongs to the syntaxin family. (359 aa)
TRIM67Tripartite motif containing 67. (780 aa)
ARFIP1ADP ribosylation factor interacting protein 1. (402 aa)
SEC31BSEC31 homolog B, COPII coat complex component. (1127 aa)
A0A4W2CKS2Uncharacterized protein. (335 aa)
RAB36RAB36, member RAS oncogene family. (314 aa)
NAPANSF attachment protein alpha. (295 aa)
SEC23IPSEC23 interacting protein. (1006 aa)
KDELR1ER lumen protein-retaining receptor. (230 aa)
GDI2Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (445 aa)
A0A4W2CN27Uncharacterized protein. (75 aa)
VAMP2V-SNARE coiled-coil homology domain-containing protein. (118 aa)
TRAPPC1Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (145 aa)
RAB18RAB18, member RAS oncogene family. (234 aa)
VAMP4Vesicle associated membrane protein 4. (144 aa)
KDELR2ER lumen protein-retaining receptor. (212 aa)
ARF5ADP ribosylation factor 5; Belongs to the small GTPase superfamily. Arf family. (180 aa)
RAB3IPSec2p domain-containing protein. (460 aa)
RAB3GAP2RAB3 GTPase activating non-catalytic protein subunit 2. (1401 aa)
COPG2Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (871 aa)
TSGA13Testis specific 13. (274 aa)
RIC1RIC1 homolog, RAB6A GEF complex partner 1. (1444 aa)
KDM4CLysine demethylase 4C. (1053 aa)
SCFD1Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family. (702 aa)
LYZL6Uncharacterized protein; Belongs to the glycosyl hydrolase 22 family. (335 aa)
SNAP25Synaptosomal-associated protein; Belongs to the SNAP-25 family. (206 aa)
GOLGA3Golgin A3. (1496 aa)
RABEPKRab9 effector protein with kelch motifs. (372 aa)
PREBProlactin regulatory element binding. (418 aa)
A0A4W2CYK1Uncharacterized protein. (89 aa)
NBASNeuroblastoma amplified sequence. (2371 aa)
PLIN3Perilipin; Belongs to the perilipin family. (438 aa)
SEC22ASEC22 homolog A, vesicle trafficking protein; Belongs to the synaptobrevin family. (307 aa)
RAB19RAB19, member RAS oncogene family. (217 aa)
A0A4W2D4F7Uncharacterized protein. (145 aa)
SEC23BProtein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (767 aa)
ARFGAP2ADP ribosylation factor GTPase activating protein 2. (520 aa)
TRAPPC12Trafficking protein particle complex 12. (789 aa)
BET1Bet1 golgi vesicular membrane trafficking protein. (142 aa)
RASL12RAS like family 12. (266 aa)
SEC31ASEC31 homolog A, COPII coat complex component. (1266 aa)
CCDC185Coiled-coil domain containing 185. (629 aa)
TBC1D20TBC1 domain family member 20. (403 aa)
RAB6BRAB6B, member RAS oncogene family. (223 aa)
SNAP47Synaptosome associated protein 47. (480 aa)
RAB3GAP1RAB3 GTPase activating protein catalytic subunit 1. (991 aa)
SEC24ASEC24 homolog A, COPII coat complex component. (1090 aa)
CERS1TLC domain-containing protein. (632 aa)
SEC24BSEC24 homolog B, COPII coat complex component. (1459 aa)
STX18Syntaxin 18. (440 aa)
RAB43Uncharacterized protein. (302 aa)
ARF4ADP ribosylation factor 4; Belongs to the small GTPase superfamily. Arf family. (180 aa)
LOC113901678Uncharacterized protein. (145 aa)
STX1ASyntaxin 1A. (373 aa)
RAB34RAB34, member RAS oncogene family. (360 aa)
TMF1TATA element modulatory factor 1. (1095 aa)
COPZ2Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (210 aa)
USE1Unconventional SNARE in the ER 1. (297 aa)
RABL6RAB, member RAS oncogene family like 6. (740 aa)
ARL5AADP ribosylation factor like GTPase 5A; Belongs to the small GTPase superfamily. Arf family. (179 aa)
A0A4W2DYK7Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (230 aa)
SEC23AProtein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (765 aa)
ARFGAP3ADP ribosylation factor GTPase activating protein 3. (517 aa)
VAMP5Vesicle associated membrane protein 5. (165 aa)
A0A4W2E2Q1L-type lectin-like domain-containing protein. (183 aa)
TRAPPC3LTrafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (181 aa)
GCC2GRIP and coiled-coil domain containing 2. (1824 aa)
A0A4W2E520Uncharacterized protein. (190 aa)
TRAPPC9Trafficking protein particle complex 9. (1148 aa)
COG1Component of oligomeric golgi complex 1. (1001 aa)
STX1BSyntaxin 1B; Belongs to the syntaxin family. (314 aa)
SEC16BProtein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. (1054 aa)
GOLGA4Golgin A4. (2284 aa)
NSFN-ethylmaleimide sensitive factor, vesicle fusing ATPase. (797 aa)
A0A4W2EB55Uncharacterized protein. (345 aa)
SEC24CSEC24 homolog C, COPII coat complex component. (1117 aa)
CHMLRab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. (651 aa)
STX16t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (326 aa)
USP6NLUSP6 N-terminal like. (837 aa)
CCDC138Coiled-coil domain containing 138. (699 aa)
A0A4W2EDS0Uncharacterized protein. (219 aa)
COPB1Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (953 aa)
RGP1RGP1 homolog, RAB6A GEF complex partner 1. (394 aa)
YKT6YKT6 v-SNARE homolog; Belongs to the synaptobrevin family. (198 aa)
ARFGAP1ADP ribosylation factor GTPase activating protein 1. (429 aa)
STX11Syntaxin 11; Belongs to the syntaxin family. (287 aa)
ACBD3Acyl-CoA binding domain containing 3. (528 aa)
SNAP23Synaptosomal-associated protein; Belongs to the SNAP-25 family. (211 aa)
GAREM2GRB2 associated regulator of MAPK1 subtype 2. (874 aa)
GOLGB1Golgin B1. (3273 aa)
STXBP2Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family. (593 aa)
A0A4W2EPT3GOLD domain-containing protein. (201 aa)
TMED10Transmembrane p24 trafficking protein 10. (219 aa)
COG2Component of oligomeric golgi complex 2. (739 aa)
RABGGTARab geranylgeranyltransferase subunit alpha. (567 aa)
A0A4W2EU02t-SNARE coiled-coil homology domain-containing protein. (161 aa)
A0A4W2EW97Uncharacterized protein. (217 aa)
TRAPPC3Trafficking protein particle complex 3. (299 aa)
STX17Syntaxin 17; Belongs to the syntaxin family. (302 aa)
SMIM7Small integral membrane protein 7. (101 aa)
COPACoatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1224 aa)
FILIP1LFilamin A interacting protein 1 like. (1183 aa)
RINT1RAD50 interactor 1. (792 aa)
COG5Component of oligomeric golgi complex 5. (843 aa)
VTI1BVesicle transport through interaction with t-SNAREs 1B. (232 aa)
A0A4W2F9D6GOLD domain-containing protein. (215 aa)
SAR1BSecretion associated Ras related GTPase 1B; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
NAPBNSF attachment protein beta. (259 aa)
VAMP8Vesicle associated membrane protein 8. (100 aa)
STXBP3Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family. (576 aa)
COPZ1Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (288 aa)
GOLGA2Uncharacterized protein. (1032 aa)
SNAP29Synaptosome associated protein 29. (258 aa)
STXBP1Syntaxin binding protein 1; Belongs to the STXBP/unc-18/SEC1 family. (603 aa)
SAR1ASecretion associated Ras related GTPase 1A; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
GOLGA1Golgin A1. (1044 aa)
ARFRP1ADP ribosylation factor related protein 1. (201 aa)
COG6Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. (657 aa)
COG7Component of oligomeric golgi complex 7. (900 aa)
CCDC70Coiled-coil domain containing 70. (233 aa)
RABGAP1RAB GTPase activating protein 1. (1069 aa)
COG3Component of oligomeric golgi complex 3; Belongs to the mitochondrial carrier (TC 2.A.29) family. (1023 aa)
SEC22BSEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family. (215 aa)
ZW10Zw10 kinetochore protein. (779 aa)
RAB24RAB24, member RAS oncogene family. (203 aa)
RABGGTBGeranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (331 aa)
TRAPPC6BTrafficking protein particle complex 6B. (158 aa)
LOC113895523GOLD domain-containing protein. (225 aa)
TRAPPC4Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (219 aa)
RAB6ARAB6A, member RAS oncogene family. (208 aa)
SEC24DSEC24 homolog D, COPII coat complex component. (1032 aa)
A0A4W2H6V9Uncharacterized protein. (137 aa)
STX6Syntaxin 6; Belongs to the syntaxin family. (255 aa)
EIPR1EARP complex and GARP complex interacting protein 1. (388 aa)
BET1Lt-SNARE coiled-coil homology domain-containing protein. (187 aa)
RAB9ARAB9A, member RAS oncogene family. (203 aa)
RAB33BRAB33B, member RAS oncogene family. (229 aa)
STX12Syntaxin 12; Belongs to the syntaxin family. (274 aa)
ANKRD40CLUncharacterized protein. (140 aa)
RABL3RAB, member of RAS oncogene family like 3. (236 aa)
VPS50VPS50 subunit of EARP/GARPII complex. (964 aa)
VPS53VPS53 subunit of GARP complex. (832 aa)
SYS1Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family. (156 aa)
STX2Syntaxin 2; Belongs to the syntaxin family. (317 aa)
STX19Syntaxin 19; Belongs to the syntaxin family. (292 aa)
RAB39ARAB39A, member RAS oncogene family. (217 aa)
ARL1ADP ribosylation factor like GTPase 1; Belongs to the small GTPase superfamily. Arf family. (187 aa)
TRAPPC10Foie-gras_1 domain-containing protein. (1259 aa)
STX10Syntaxin 10. (249 aa)
TMED9Transmembrane p24 trafficking protein 9. (235 aa)
USO1USO1 vesicle transport factor. (965 aa)
STX7Syntaxin 7; Belongs to the syntaxin family. (261 aa)
COPB2Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (906 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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