(11 nodes) COMM domain, and Cytoplasmic sequestering of NF-kappaB network (Bos indicus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CCDC22	Coiled-coil domain containing 22. (594 aa)
	COMMD4	COMM domain containing 4. (327 aa)
	A0A4W2CFE6	COMM domain-containing protein. (85 aa)
	COMMD5	COMM domain containing 5. (224 aa)
	COMMD10	COMM domain containing 10. (202 aa)
	COMMD7	Uncharacterized protein. (271 aa)
	CCDC93	Coiled-coil domain containing 93. (637 aa)
	COMMD2	COMM domain containing 2. (199 aa)
	COMMD9	COMM domain containing 9. (198 aa)
	COMMD1	Copper metabolism domain containing 1. (196 aa)
	COMMD8	COMM domain containing 8. (247 aa)

Your Current Organism:

Bos indicus

NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A4W2CFE6	CCDC22	A0A4W2CFE6	A0A4W2BT91	COMM domain-containing protein.	Coiled-coil domain containing 22.	0.952
A0A4W2CFE6	CCDC93	A0A4W2CFE6	A0A4W2DGN0	COMM domain-containing protein.	Coiled-coil domain containing 93.	0.872
A0A4W2CFE6	COMMD1	A0A4W2CFE6	A0A4W2E9W6	COMM domain-containing protein.	Copper metabolism domain containing 1.	0.951
A0A4W2CFE6	COMMD10	A0A4W2CFE6	A0A4W2D9W6	COMM domain-containing protein.	COMM domain containing 10.	0.946
A0A4W2CFE6	COMMD2	A0A4W2CFE6	A0A4W2DH84	COMM domain-containing protein.	COMM domain containing 2.	0.908
A0A4W2CFE6	COMMD4	A0A4W2CFE6	A0A4W2C5G5	COMM domain-containing protein.	COMM domain containing 4.	0.902
A0A4W2CFE6	COMMD5	A0A4W2CFE6	A0A4W2CIB8	COMM domain-containing protein.	COMM domain containing 5.	0.911
A0A4W2CFE6	COMMD7	A0A4W2CFE6	A0A4W2DE76	COMM domain-containing protein.	Uncharacterized protein.	0.945
A0A4W2CFE6	COMMD8	A0A4W2CFE6	A0A4W2EX64	COMM domain-containing protein.	COMM domain containing 8.	0.869
A0A4W2CFE6	COMMD9	A0A4W2CFE6	A0A4W2E8T2	COMM domain-containing protein.	COMM domain containing 9.	0.983
CCDC22	A0A4W2CFE6	A0A4W2BT91	A0A4W2CFE6	Coiled-coil domain containing 22.	COMM domain-containing protein.	0.952
CCDC22	CCDC93	A0A4W2BT91	A0A4W2DGN0	Coiled-coil domain containing 22.	Coiled-coil domain containing 93.	0.972
CCDC22	COMMD1	A0A4W2BT91	A0A4W2E9W6	Coiled-coil domain containing 22.	Copper metabolism domain containing 1.	0.964
CCDC22	COMMD10	A0A4W2BT91	A0A4W2D9W6	Coiled-coil domain containing 22.	COMM domain containing 10.	0.981
CCDC22	COMMD2	A0A4W2BT91	A0A4W2DH84	Coiled-coil domain containing 22.	COMM domain containing 2.	0.960
CCDC22	COMMD4	A0A4W2BT91	A0A4W2C5G5	Coiled-coil domain containing 22.	COMM domain containing 4.	0.943
CCDC22	COMMD5	A0A4W2BT91	A0A4W2CIB8	Coiled-coil domain containing 22.	COMM domain containing 5.	0.938
CCDC22	COMMD7	A0A4W2BT91	A0A4W2DE76	Coiled-coil domain containing 22.	Uncharacterized protein.	0.920
CCDC22	COMMD8	A0A4W2BT91	A0A4W2EX64	Coiled-coil domain containing 22.	COMM domain containing 8.	0.973
CCDC22	COMMD9	A0A4W2BT91	A0A4W2E8T2	Coiled-coil domain containing 22.	COMM domain containing 9.	0.927

page 1 of 6

Server load: medium (52%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About