(5 nodes) DNA-binding protein inhibitor network (Bos indicus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ID2	Inhibitor of DNA binding 2. (134 aa)
	TCF3	Transcription factor 3. (640 aa)
	ID4	Inhibitor of DNA binding 4, HLH protein. (164 aa)
	ID3	Inhibitor of DNA binding 3, HLH protein. (119 aa)
	ID1	Inhibitor of DNA binding 1, HLH protein. (154 aa)

Your Current Organism:

Bos indicus

NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ID1	ID2	A0A4W2H079	A0A4W2CY22	Inhibitor of DNA binding 1, HLH protein.	Inhibitor of DNA binding 2.	0.951
ID1	ID3	A0A4W2H079	A0A4W2F632	Inhibitor of DNA binding 1, HLH protein.	Inhibitor of DNA binding 3, HLH protein.	0.965
ID1	ID4	A0A4W2H079	A0A4W2DSC6	Inhibitor of DNA binding 1, HLH protein.	Inhibitor of DNA binding 4, HLH protein.	0.830
ID1	TCF3	A0A4W2H079	A0A4W2DEZ4	Inhibitor of DNA binding 1, HLH protein.	Transcription factor 3.	0.990
ID2	ID1	A0A4W2CY22	A0A4W2H079	Inhibitor of DNA binding 2.	Inhibitor of DNA binding 1, HLH protein.	0.951
ID2	ID3	A0A4W2CY22	A0A4W2F632	Inhibitor of DNA binding 2.	Inhibitor of DNA binding 3, HLH protein.	0.952
ID2	TCF3	A0A4W2CY22	A0A4W2DEZ4	Inhibitor of DNA binding 2.	Transcription factor 3.	0.606
ID3	ID1	A0A4W2F632	A0A4W2H079	Inhibitor of DNA binding 3, HLH protein.	Inhibitor of DNA binding 1, HLH protein.	0.965
ID3	ID2	A0A4W2F632	A0A4W2CY22	Inhibitor of DNA binding 3, HLH protein.	Inhibitor of DNA binding 2.	0.952
ID3	ID4	A0A4W2F632	A0A4W2DSC6	Inhibitor of DNA binding 3, HLH protein.	Inhibitor of DNA binding 4, HLH protein.	0.832
ID3	TCF3	A0A4W2F632	A0A4W2DEZ4	Inhibitor of DNA binding 3, HLH protein.	Transcription factor 3.	0.738
ID4	ID1	A0A4W2DSC6	A0A4W2H079	Inhibitor of DNA binding 4, HLH protein.	Inhibitor of DNA binding 1, HLH protein.	0.830
ID4	ID3	A0A4W2DSC6	A0A4W2F632	Inhibitor of DNA binding 4, HLH protein.	Inhibitor of DNA binding 3, HLH protein.	0.832
ID4	TCF3	A0A4W2DSC6	A0A4W2DEZ4	Inhibitor of DNA binding 4, HLH protein.	Transcription factor 3.	0.606
TCF3	ID1	A0A4W2DEZ4	A0A4W2H079	Transcription factor 3.	Inhibitor of DNA binding 1, HLH protein.	0.990
TCF3	ID2	A0A4W2DEZ4	A0A4W2CY22	Transcription factor 3.	Inhibitor of DNA binding 2.	0.606
TCF3	ID3	A0A4W2DEZ4	A0A4W2F632	Transcription factor 3.	Inhibitor of DNA binding 3, HLH protein.	0.738
TCF3	ID4	A0A4W2DEZ4	A0A4W2DSC6	Transcription factor 3.	Inhibitor of DNA binding 4, HLH protein.	0.606

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