STRINGSTRING
PDX1 PDX1 SHOX SHOX TSHZ1 TSHZ1 GSX1 GSX1 FAM107A FAM107A FEZF2 FEZF2 MAB21L1 MAB21L1 ONECUT2 ONECUT2 ATOH7 ATOH7 POU4F2 POU4F2 EMX2 EMX2 VAX1 VAX1 ZNF385D ZNF385D FOXP4 FOXP4 ISL2 ISL2 EBF3 EBF3 KCNJ11 KCNJ11 ABCC8 ABCC8 CUX2 CUX2 PHOX2A PHOX2A CHD7 CHD7 INSM1 INSM1 VAX2 VAX2 BHLHE22 BHLHE22 EYA2 EYA2 TLX2 TLX2 SLC30A8 SLC30A8 FOXA2 FOXA2 NEUROD6 NEUROD6 ONECUT1 ONECUT1 MYT1 MYT1 FOXB1 FOXB1 ZIC2 ZIC2 IRX6 IRX6 GDF6 GDF6 LHX6 LHX6 PHACTR4 PHACTR4 NFIB NFIB PTF1A PTF1A SIX5 SIX5 SIX3 SIX3 BARHL2 BARHL2 PCSK1 PCSK1 SIX4 SIX4 HOMEZ HOMEZ NFIC NFIC MYT1L MYT1L DLX1 DLX1 SIX1 SIX1 PAX4 PAX4 SOX5 SOX5 DLX2 DLX2 GSX2 GSX2 NFIA NFIA ASCL1 ASCL1 ZBED1 ZBED1 FOXP1 FOXP1 BSX BSX HOPX HOPX HELT HELT TBX2 TBX2 LOC113888926 LOC113888926 PAX2 PAX2 FOXN4 FOXN4 NEUROD2 NEUROD2 LHX9 LHX9 PAX6 PAX6 FOXP2 FOXP2 EYA1 EYA1 LHX5 LHX5 RFX6 RFX6 FEZF1 FEZF1 LMX1B LMX1B FOXG1 FOXG1 ZFHX4 ZFHX4 EBF4 EBF4 EYA4 EYA4 POU3F3 POU3F3 DMRTA1 DMRTA1 NR2F1 NR2F1 VSX2 VSX2 TAL2 TAL2 NEUROD1 NEUROD1 SIX6 SIX6 NKX6-1 NKX6-1 MTMR11 MTMR11 GBX2 GBX2 SP8 SP8 ABCC9 ABCC9 TM7SF3 TM7SF3 LMX1A LMX1A LHX4 LHX4 SATB2 SATB2 MAFA MAFA DACH1 DACH1 LHX3 LHX3 EMX1 EMX1 EYA3 EYA3 OTX2 OTX2 ISL1 ISL1 BARHL1 BARHL1 TLX1 TLX1 LXN LXN NEUROD4 NEUROD4 STMN2 STMN2 SOX11 SOX11 TBR1 TBR1 NR2F2 NR2F2 SIX2 SIX2 PITX2 PITX2 NEUROG2 NEUROG2 OR2T6 OR2T6 OLIG3 OLIG3 ZGLP1 ZGLP1 SP3 SP3 SP9 SP9 CUX1 CUX1 KCNJ8 KCNJ8 PHOX2B PHOX2B A0A4W2HM25 A0A4W2HM25 DMRTA2 DMRTA2 LHX2 LHX2 TLX3 TLX3 DBX1 DBX1 SOX14 SOX14 IRX1 IRX1 SOX21 SOX21
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PDX1Pancreatic and duodenal homeobox 1. (285 aa)
SHOXShort stature homeobox. (294 aa)
TSHZ1Teashirt zinc finger homeobox 1. (1119 aa)
GSX1GS homeobox 1. (335 aa)
FAM107AFamily with sequence similarity 107 member A. (225 aa)
FEZF2FEZ family zinc finger 2. (459 aa)
MAB21L1Mab-21 like 1. (359 aa)
ONECUT2One cut domain family member. (557 aa)
ATOH7Atonal bHLH transcription factor 7. (152 aa)
POU4F2POU domain protein. (408 aa)
EMX2Empty spiracles homeobox 2. (255 aa)
VAX1Ventral anterior homeobox 1. (334 aa)
ZNF385DZinc finger protein 385D. (406 aa)
FOXP4Forkhead box P4. (746 aa)
ISL2ISL LIM homeobox 2. (359 aa)
EBF3EBF transcription factor 3. (596 aa)
KCNJ11Potassium voltage-gated channel subfamily J member 11. (388 aa)
ABCC8ATP binding cassette subfamily C member 8. (1529 aa)
CUX2Homeobox protein cut-like. (1549 aa)
PHOX2APaired like homeobox 2A. (284 aa)
CHD7Chromodomain helicase DNA binding protein 7. (2990 aa)
INSM1INSM transcriptional repressor 1. (521 aa)
VAX2Ventral anterior homeobox 2. (285 aa)
BHLHE22Basic helix-loop-helix family member e22. (361 aa)
EYA2Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (552 aa)
TLX2T cell leukemia homeobox 2. (284 aa)
SLC30A8Solute carrier family 30 member 8. (350 aa)
FOXA2Forkhead box A2. (467 aa)
NEUROD6Neurogenic differentiation factor. (337 aa)
ONECUT1One cut domain family member. (712 aa)
MYT1Myelin transcription factor 1. (1171 aa)
FOXB1Forkhead box B1. (325 aa)
ZIC2Zic family member 2. (525 aa)
IRX6Iroquois homeobox 6. (471 aa)
GDF6Growth differentiation factor 6. (470 aa)
LHX6LIM homeobox 6. (560 aa)
PHACTR4Phosphatase and actin regulator. (712 aa)
NFIBNuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (570 aa)
PTF1APancreas associated transcription factor 1a. (326 aa)
SIX5SIX homeobox 5. (738 aa)
SIX3SIX homeobox 3. (399 aa)
BARHL2BarH like homeobox 2. (383 aa)
PCSK1Proprotein convertase subtilisin/kexin type 1; Belongs to the peptidase S8 family. (753 aa)
SIX4SIX homeobox 4. (786 aa)
HOMEZHomeobox and leucine zipper encoding. (647 aa)
NFICNuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (569 aa)
MYT1LMyelin transcription factor 1 like. (1205 aa)
DLX1Distal-less homeobox 1. (255 aa)
SIX1SIX homeobox 1. (284 aa)
PAX4Paired box 4. (368 aa)
SOX5SRY-box transcription factor 5. (763 aa)
DLX2Distal-less homeobox 2. (331 aa)
GSX2GS homeobox 2. (305 aa)
NFIANuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (553 aa)
ASCL1Achaete-scute family bHLH transcription factor 1. (219 aa)
ZBED1Zinc finger BED-type containing 1. (707 aa)
FOXP1Fork-head domain-containing protein. (691 aa)
BSXBrain specific homeobox. (232 aa)
HOPXHomeobox domain-containing protein. (73 aa)
HELTHelt bHLH transcription factor. (241 aa)
TBX2T-box transcription factor 2. (714 aa)
LOC113888926Homeobox domain-containing protein. (308 aa)
PAX2Paired box 2. (514 aa)
FOXN4Forkhead box N4. (546 aa)
NEUROD2Neurogenic differentiation factor. (382 aa)
LHX9LIM homeobox 9. (388 aa)
PAX6Paired box 6. (455 aa)
FOXP2Forkhead box P2. (732 aa)
EYA1Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (700 aa)
LHX5LIM homeobox 5. (402 aa)
RFX6Regulatory factor X6. (927 aa)
FEZF1FEZ family zinc finger 1. (476 aa)
LMX1BUncharacterized protein. (606 aa)
FOXG1Forkhead box G1. (491 aa)
ZFHX4Zinc finger homeobox 4. (3594 aa)
EBF4EBF family member 4. (695 aa)
EYA4Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (645 aa)
POU3F3POU domain protein. (499 aa)
DMRTA1DMRT like family A1. (496 aa)
NR2F1Nuclear receptor subfamily 2 group F member 1. (424 aa)
VSX2Visual system homeobox 2. (361 aa)
TAL2TAL bHLH transcription factor 2. (105 aa)
NEUROD1Neurogenic differentiation factor. (356 aa)
SIX6SIX homeobox 6. (246 aa)
NKX6-1NK6 homeobox 1. (366 aa)
MTMR11Myotubularin related protein 11. (698 aa)
GBX2Gastrulation brain homeobox 2. (349 aa)
SP8Sp8 transcription factor. (505 aa)
ABCC9ATP binding cassette subfamily C member 9. (1549 aa)
TM7SF3Transmembrane 7 superfamily member 3. (570 aa)
LMX1ALIM homeobox transcription factor 1 alpha. (457 aa)
LHX4LIM homeobox 4. (390 aa)
SATB2DNA-binding protein SATB. (733 aa)
MAFAMAF bZIP transcription factor A. (351 aa)
DACH1Dachshund family transcription factor 1. (755 aa)
LHX3LIM homeobox 3. (403 aa)
EMX1Empty spiracles homeobox 1. (288 aa)
EYA3Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (573 aa)
OTX2Orthodenticle homeobox 2. (289 aa)
ISL1ISL LIM homeobox 1. (349 aa)
BARHL1BarH like homeobox 1. (327 aa)
TLX1T cell leukemia homeobox 1. (335 aa)
LXNLatexin. (222 aa)
NEUROD4Neurogenic differentiation factor. (330 aa)
STMN2Stathmin; Belongs to the stathmin family. (179 aa)
SOX11Transcription factor SOX. (451 aa)
TBR1T-box brain transcription factor 1. (682 aa)
NR2F2Nuclear receptor subfamily 2 group F member 2. (414 aa)
SIX2SIX homeobox 2. (296 aa)
PITX2Homeobox protein. (325 aa)
NEUROG2Neurogenin 2. (270 aa)
OR2T6Olfactory receptor. (309 aa)
OLIG3Oligodendrocyte transcription factor 3. (272 aa)
ZGLP1Zinc finger GATA like protein 1. (273 aa)
SP3Sp3 transcription factor. (781 aa)
SP9Sp9 transcription factor. (481 aa)
CUX1Homeobox protein cut-like. (1625 aa)
KCNJ8Potassium voltage-gated channel subfamily J member 8. (424 aa)
PHOX2BPaired like homeobox 2B. (315 aa)
A0A4W2HM25KRAB domain-containing protein. (109 aa)
DMRTA2DMRT like family A2. (535 aa)
LHX2LIM homeobox 2. (406 aa)
TLX3T cell leukemia homeobox 3. (338 aa)
DBX1Developing brain homeobox 1. (345 aa)
SOX14SRY-box transcription factor 14. (240 aa)
IRX1Iroquois homeobox 1. (476 aa)
SOX21SRY-box transcription factor 21. (277 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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