STRINGSTRING
IFT140 IFT140 CLUAP1 CLUAP1 IFT88 IFT88 TMEM216 TMEM216 TMEM138 TMEM138 LZTFL1 LZTFL1 TTC9C TTC9C KIF9 KIF9 TMEM231 TMEM231 INPP5E INPP5E A0A4W2BYE9 A0A4W2BYE9 RP2 RP2 A0A4W2C2E5 A0A4W2C2E5 TCTN3 TCTN3 ARL3 ARL3 NEK8 NEK8 CC2D2B CC2D2B A0A4W2C5U2 A0A4W2C5U2 UNC119B UNC119B RPGRIP1L RPGRIP1L INTU INTU B9D2 B9D2 TMEM237 TMEM237 DNAJC7 DNAJC7 TUB TUB A0A4W2CMR7 A0A4W2CMR7 KLHL17 KLHL17 PDE6D PDE6D TMEM67 TMEM67 KIFAP3 KIFAP3 WDR35 WDR35 RPGRIP1 RPGRIP1 IFT43 IFT43 IFT74 IFT74 NPHP1 NPHP1 BBS4 BBS4 A0A4W2D734 A0A4W2D734 TRAF3IP1 TRAF3IP1 SLC27A6 SLC27A6 A0A4W2DAH2 A0A4W2DAH2 SLC27A3 SLC27A3 TTC24 TTC24 KLHL41 KLHL41 KIF3C KIF3C SLC27A1 SLC27A1 BBS7 BBS7 A0A4W2DM36 A0A4W2DM36 KIF3A KIF3A CEP290 CEP290 MKS1 MKS1 BBS12 BBS12 KIAA0556 KIAA0556 IFT122 IFT122 IFT46 IFT46 TMEM107 TMEM107 NPHP3 NPHP3 WDPCP WDPCP IFT81 IFT81 TCTN2 TCTN2 IFT20 IFT20 BBS2 BBS2 NPHP4 NPHP4 TCTN1 TCTN1 SLC27A2 SLC27A2 BBS1 BBS1 TULP3 TULP3 TMEM17 TMEM17 BBS9 BBS9 TOMM34 TOMM34 SLC27A4 SLC27A4 A0A4W2EMZ0 A0A4W2EMZ0 IQCB1 IQCB1 IFT172 IFT172 REM2 REM2 CC2D2A CC2D2A A0A4W2EUX0 A0A4W2EUX0 NEK1 NEK1 INVS INVS TTC21B TTC21B WDR19 WDR19 A0A4W2EYX6 A0A4W2EYX6 HSPB11 HSPB11 IFT27 IFT27 ARL6 ARL6 IFT57 IFT57 IFT80 IFT80 B9D1 B9D1 GRASP GRASP TTC8 TTC8 KIF3B KIF3B FUZ FUZ IFT52 IFT52 ARL13B ARL13B TTC32 TTC32 AHI1 AHI1 TTC26 TTC26
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
IFT140Intraflagellar transport 140. (1457 aa)
CLUAP1Clusterin associated protein 1. (561 aa)
IFT88Intraflagellar transport 88. (762 aa)
TMEM216Transmembrane protein 216. (149 aa)
TMEM138Transmembrane protein 138. (162 aa)
LZTFL1Leucine zipper transcription factor like 1. (344 aa)
TTC9CTetratricopeptide repeat domain 9C. (171 aa)
KIF9Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (911 aa)
TMEM231Transmembrane protein 231. (316 aa)
INPP5EInositol polyphosphate-5-phosphatase E. (656 aa)
A0A4W2BYE9Uncharacterized protein. (70 aa)
RP2Protein XRP2; Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization. (350 aa)
A0A4W2C2E5Uncharacterized protein. (453 aa)
TCTN3Tectonic family member 3. (600 aa)
ARL3ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family. (189 aa)
NEK8NIMA related kinase 8. (698 aa)
CC2D2BCoiled-coil and C2 domain containing 2B. (401 aa)
A0A4W2C5U2Uncharacterized protein. (85 aa)
UNC119BUnc-119 lipid binding chaperone B. (254 aa)
RPGRIP1LRPGRIP1 like. (1274 aa)
INTUInturned planar cell polarity protein. (933 aa)
B9D2B9 domain containing 2. (175 aa)
TMEM237Transmembrane protein 237. (449 aa)
DNAJC7DnaJ heat shock protein family (Hsp40) member C7. (494 aa)
TUBTubby-like protein; Belongs to the TUB family. (563 aa)
A0A4W2CMR7Uncharacterized protein. (186 aa)
KLHL17Kelch like family member 17. (1179 aa)
PDE6DRetinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes. Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location. Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E. Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude. Stabilizes ARL3-GTP by decreasing the nucleotide [...] (150 aa)
TMEM67Transmembrane protein 67. (996 aa)
KIFAP3Kinesin associated protein 3. (793 aa)
WDR35WD repeat-containing protein 35; As a component of the IFT complex A (IFT-A), a complex required for retrograde ciliary transport and entry into cilia of G protein-coupled receptors (GPCRs), it is involved in ciliogenesis and ciliary protein trafficking. (1238 aa)
RPGRIP1RPGR interacting protein 1. (1243 aa)
IFT43Uncharacterized protein. (245 aa)
IFT74Intraflagellar transport 74. (600 aa)
NPHP1Nephrocystin 1. (697 aa)
BBS4Bardet-Biedl syndrome 4. (519 aa)
A0A4W2D734TPR_REGION domain-containing protein. (664 aa)
TRAF3IP1TRAF3 interacting protein 1. (620 aa)
SLC27A6Solute carrier family 27 member 6. (635 aa)
A0A4W2DAH2Uncharacterized protein. (148 aa)
SLC27A3Solute carrier family 27 member 3. (677 aa)
TTC24Tetratricopeptide repeat domain 24. (574 aa)
KLHL41Kelch like family member 41. (606 aa)
KIF3CKinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (792 aa)
SLC27A1Solute carrier family 27 member 1. (676 aa)
BBS7Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. (715 aa)
A0A4W2DM36Uncharacterized protein. (110 aa)
KIF3AKinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (892 aa)
CEP290Centrosomal protein 290. (2478 aa)
MKS1MKS transition zone complex subunit 1. (598 aa)
BBS12Bardet-Biedl syndrome 12. (710 aa)
KIAA0556KIAA0556. (1657 aa)
IFT122Intraflagellar transport 122. (1091 aa)
IFT46Intraflagellar transport 46. (338 aa)
TMEM107Transmembrane protein 107. (140 aa)
NPHP3TPR_REGION domain-containing protein. (1331 aa)
WDPCPWD repeat containing planar cell polarity effector. (609 aa)
IFT81Intraflagellar transport 81. (698 aa)
TCTN2Tectonic family member 2. (715 aa)
IFT20Intraflagellar transport 20. (156 aa)
BBS2Bardet-Biedl syndrome 2 protein homolog. (721 aa)
NPHP4Nephrocystin 4. (1431 aa)
TCTN1Tectonic family member 1. (588 aa)
SLC27A2Solute carrier family 27 member 2. (711 aa)
BBS1BBS1 domain-containing protein. (667 aa)
TULP3Tubby-like protein; Belongs to the TUB family. (482 aa)
TMEM17Transmembrane protein 17. (198 aa)
BBS9Bardet-Biedl syndrome 9. (887 aa)
TOMM34Translocase of outer mitochondrial membrane 34. (309 aa)
SLC27A4Solute carrier family 27 member 4. (643 aa)
A0A4W2EMZ0Uncharacterized protein. (110 aa)
IQCB1IQ motif containing B1. (598 aa)
IFT172Intraflagellar transport 172. (1783 aa)
REM2GTP-binding protein; Belongs to the small GTPase superfamily. RGK family. (340 aa)
CC2D2ACoiled-coil and C2 domain containing 2A. (1620 aa)
A0A4W2EUX0Uncharacterized protein. (664 aa)
NEK1NIMA related kinase 1. (1238 aa)
INVSInversin. (1088 aa)
TTC21BTetratricopeptide repeat domain 21B. (1315 aa)
WDR19WD repeat domain 19. (1342 aa)
A0A4W2EYX6Uncharacterized protein. (467 aa)
HSPB11Heat shock protein family B (small) member 11. (143 aa)
IFT27Uncharacterized protein. (238 aa)
ARL6ADP ribosylation factor like GTPase 6; Belongs to the small GTPase superfamily. Arf family. (186 aa)
IFT57Intraflagellar transport 57. (429 aa)
IFT80Intraflagellar transport 80. (781 aa)
B9D1B9 domain containing 1. (239 aa)
GRASPGeneral receptor for phosphoinositides 1 associated scaffold protein. (394 aa)
TTC8Tetratricopeptide repeat domain 8. (501 aa)
KIF3BKinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (743 aa)
FUZFuzzy planar cell polarity protein. (419 aa)
IFT52Intraflagellar transport 52. (440 aa)
ARL13BADP ribosylation factor like GTPase 13B. (429 aa)
TTC32Tetratricopeptide repeat domain 32. (148 aa)
AHI1Abelson helper integration site 1. (1163 aa)
TTC26Tetratricopeptide repeat domain 26. (554 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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