(30 nodes) Cytosolic large ribosomal subunit network (Bos indicus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A4W2BTS8	KRAB domain-containing protein. (281 aa)
	RPL3	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (453 aa)
	A0A4W2C6Q6	Ribosomal_L2_C domain-containing protein. (235 aa)
	A0A4W2C8L2	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (196 aa)
	A0A4W2CK10	Uncharacterized protein. (83 aa)
	RPS5	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (223 aa)
	RPL28	Ribosomal protein L28. (151 aa)
	A0A4W2CR02	Ribosomal_L18e/L15P domain-containing protein. (127 aa)
	A0A4W2CTS0	Ribosomal_L18A domain-containing protein. (182 aa)
	A0A4W2D1R1	Uncharacterized protein. (56 aa)
	RPL4	Ribos_L4_asso_C domain-containing protein. (422 aa)
	RPL35	Uncharacterized protein. (123 aa)
	A0A4W2DJQ3	Uncharacterized protein. (83 aa)
	A0A4W2DME3	Uncharacterized protein. (121 aa)
	A0A4W2E142	Ribosomal protein L37; Binds to the 23S rRNA. (91 aa)
	A0A4W2E2X2	Ribosomal_L7Ae domain-containing protein. (213 aa)
	A0A4W2EBL6	Uncharacterized protein. (131 aa)
	A0A4W2EEI6	Ribosomal_L18_c domain-containing protein. (227 aa)
	A0A4W2EHE4	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family. (158 aa)
	A0A4W2EQR0	Uncharacterized protein. (74 aa)
	A0A4W2ESB2	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (160 aa)
	RPL29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (152 aa)
	A0A4W2FKX0	Uncharacterized protein. (126 aa)
	RPL24	Ribosomal protein L24. (157 aa)
	RPL27A	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family. (148 aa)
	RPL15-2	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	RPL23	Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (157 aa)
	LOC113903101	KOW domain-containing protein. (154 aa)
	RPL30	Ribosomal protein L30. (115 aa)
	A0A4W2II62	Uncharacterized protein. (93 aa)

Your Current Organism:

Bos indicus

NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A4W2BTS8	A0A4W2C6Q6	A0A4W2BTS8	A0A4W2C6Q6	KRAB domain-containing protein.	Ribosomal_L2_C domain-containing protein.	0.999
A0A4W2BTS8	A0A4W2C8L2	A0A4W2BTS8	A0A4W2C8L2	KRAB domain-containing protein.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.999
A0A4W2BTS8	A0A4W2CK10	A0A4W2BTS8	A0A4W2CK10	KRAB domain-containing protein.	Uncharacterized protein.	0.999
A0A4W2BTS8	A0A4W2CR02	A0A4W2BTS8	A0A4W2CR02	KRAB domain-containing protein.	Ribosomal_L18e/L15P domain-containing protein.	0.998
A0A4W2BTS8	A0A4W2CTS0	A0A4W2BTS8	A0A4W2CTS0	KRAB domain-containing protein.	Ribosomal_L18A domain-containing protein.	0.998
A0A4W2BTS8	A0A4W2D1R1	A0A4W2BTS8	A0A4W2D1R1	KRAB domain-containing protein.	Uncharacterized protein.	0.977
A0A4W2BTS8	A0A4W2DJQ3	A0A4W2BTS8	A0A4W2DJQ3	KRAB domain-containing protein.	Uncharacterized protein.	0.995
A0A4W2BTS8	A0A4W2DME3	A0A4W2BTS8	A0A4W2DME3	KRAB domain-containing protein.	Uncharacterized protein.	0.999
A0A4W2BTS8	A0A4W2E142	A0A4W2BTS8	A0A4W2E142	KRAB domain-containing protein.	Ribosomal protein L37; Binds to the 23S rRNA.	0.998
A0A4W2BTS8	A0A4W2E2X2	A0A4W2BTS8	A0A4W2E2X2	KRAB domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.999
A0A4W2BTS8	A0A4W2EBL6	A0A4W2BTS8	A0A4W2EBL6	KRAB domain-containing protein.	Uncharacterized protein.	0.999
A0A4W2BTS8	A0A4W2EEI6	A0A4W2BTS8	A0A4W2EEI6	KRAB domain-containing protein.	Ribosomal_L18_c domain-containing protein.	0.998
A0A4W2BTS8	A0A4W2EHE4	A0A4W2BTS8	A0A4W2EHE4	KRAB domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	0.999
A0A4W2BTS8	A0A4W2EQR0	A0A4W2BTS8	A0A4W2EQR0	KRAB domain-containing protein.	Uncharacterized protein.	0.997
A0A4W2BTS8	A0A4W2ESB2	A0A4W2BTS8	A0A4W2ESB2	KRAB domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	0.987
A0A4W2BTS8	A0A4W2FKX0	A0A4W2BTS8	A0A4W2FKX0	KRAB domain-containing protein.	Uncharacterized protein.	0.999
A0A4W2BTS8	A0A4W2II62	A0A4W2BTS8	A0A4W2II62	KRAB domain-containing protein.	Uncharacterized protein.	0.999
A0A4W2BTS8	LOC113903101	A0A4W2BTS8	A0A4W2H8Z8	KRAB domain-containing protein.	KOW domain-containing protein.	0.999
A0A4W2BTS8	RPL15-2	A0A4W2BTS8	A0A4W2H1S4	KRAB domain-containing protein.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.998
A0A4W2BTS8	RPL23	A0A4W2BTS8	A0A4W2H8J2	KRAB domain-containing protein.	Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	0.999

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