STRINGSTRING
SF3A2 SF3A2 SF3B4 SF3B4 SF3B3 SF3B3 SF3B6 SF3B6 SF3A1 SF3A1 SF3B1 SF3B1 SF3B5 SF3B5 SF3A3 SF3A3 PHF5A PHF5A DDX46 DDX46 SF3B2 SF3B2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SF3A2Splicing factor 3a subunit 2. (477 aa)
SF3B4Uncharacterized protein. (424 aa)
SF3B3Splicing factor 3b subunit 3. (1217 aa)
SF3B6Splicing factor 3b subunit 6. (125 aa)
SF3A1Splicing factor 3a subunit 1. (793 aa)
SF3B1Splicing factor 3b subunit 1. (1304 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
SF3A3Splicing factor 3a subunit 3. (501 aa)
PHF5APHD finger protein 5A. (110 aa)
DDX46DEAD-box helicase 46. (1032 aa)
SF3B2Splicing factor 3b subunit 2. (895 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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