STRINGSTRING
PCBP4 PCBP4 A0A4W2BMG6 A0A4W2BMG6 A0A4W2BNY8 A0A4W2BNY8 A0A4W2BPQ2 A0A4W2BPQ2 LUC7L LUC7L FUS FUS A0A4W2BS61 A0A4W2BS61 A0A4W2BV70 A0A4W2BV70 RBM6 RBM6 PTBP1 PTBP1 CCAR1 CCAR1 A0A4W2C1B0 A0A4W2C1B0 EWSR1 EWSR1 ZNF318 ZNF318 PABPN1L PABPN1L A0A4W2C7Q9 A0A4W2C7Q9 SREK1 SREK1 RBFOX3 RBFOX3 TNPO1 TNPO1 A0A4W2CCQ4 A0A4W2CCQ4 SYNCRIP SYNCRIP A0A4W2CGW0 A0A4W2CGW0 PNISR PNISR U2AF2 U2AF2 A0A4W2CQ28 A0A4W2CQ28 A0A4W2CVU9 A0A4W2CVU9 HNRNPU HNRNPU SRSF6 SRSF6 A0A4W2CZU2 A0A4W2CZU2 HNRNPA1 HNRNPA1 PRPF40B PRPF40B RBM25 RBM25 ELAVL1 ELAVL1 HNRNPM HNRNPM A0A4W2D3H4 A0A4W2D3H4 A0A4W2D616 A0A4W2D616 A0A4W2D9G8 A0A4W2D9G8 SRSF10 SRSF10 A0A4W2DA51 A0A4W2DA51 SLTM SLTM YBX3 YBX3 HNRNPDL HNRNPDL TRA2A TRA2A DHX36 DHX36 A0A4W2DFX9 A0A4W2DFX9 SRSF11 SRSF11 A0A4W2DLL9 A0A4W2DLL9 PHAX PHAX RBM3 RBM3 SRPK2 SRPK2 A0A4W2DRN1 A0A4W2DRN1 SRPK1 SRPK1 ILF2 ILF2 A0A4W2E078 A0A4W2E078 SRSF3 SRSF3 U2AF1 U2AF1 HNRNPF HNRNPF PRR3 PRR3 A0A4W2E3F9 A0A4W2E3F9 TPRG1L TPRG1L A0A4W2EBS0 A0A4W2EBS0 SRSF4 SRSF4 A0A4W2ECL2 A0A4W2ECL2 SRSF7 SRSF7 RBM39 RBM39 A0A4W2EF32 A0A4W2EF32 A0A4W2EFI8 A0A4W2EFI8 A0A4W2EGB2 A0A4W2EGB2 NCBP1 NCBP1 RALY RALY HNRNPL HNRNPL A0A4W2EMR3 A0A4W2EMR3 PCBP2 PCBP2 ZC2HC1C ZC2HC1C TRA2B TRA2B SRSF5 SRSF5 HNRNPK HNRNPK TTC14 TTC14 ZFC3H1 ZFC3H1 HNRNPA3 HNRNPA3 HNRNPR HNRNPR HNRNPH1 HNRNPH1 A0A4W2EWI5 A0A4W2EWI5 MATR3 MATR3 SON SON A0A4W2F0M1 A0A4W2F0M1 ILF3 ILF3 A0A4W2F4L8 A0A4W2F4L8 ELAVL3 ELAVL3 A0A4W2F5F6 A0A4W2F5F6 YBX1 YBX1 U2AF1L4 U2AF1L4 HNRNPUL2 HNRNPUL2 SRRT SRRT PRPF38B PRPF38B ELAVL4 ELAVL4 HNRNPUL1 HNRNPUL1 HNRNPH3 HNRNPH3 PRPF40A PRPF40A HNRNPC HNRNPC HNRNPAB HNRNPAB HNRNPLL HNRNPLL SRSF1 SRSF1 SRSF9 SRSF9 A0A4W2H577 A0A4W2H577 NCBP2 NCBP2 PCBP1 PCBP1 LUC7L3 LUC7L3 SRSF2 SRSF2 SF1 SF1 HNRNPA2B1 HNRNPA2B1 CELF1 CELF1 PRPF39 PRPF39 RBM23 RBM23 A0A4W2IEN8 A0A4W2IEN8 ELAVL2 ELAVL2 PRPF4B PRPF4B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PCBP4Poly(rC) binding protein 4. (420 aa)
A0A4W2BMG6RRM domain-containing protein. (387 aa)
A0A4W2BNY8Trnau1ap domain-containing protein. (70 aa)
A0A4W2BPQ2RRM domain-containing protein. (188 aa)
LUC7LLUC7 like. (530 aa)
FUSFUS RNA binding protein. (512 aa)
A0A4W2BS61Uncharacterized protein. (262 aa)
A0A4W2BV70CSD_1 domain-containing protein. (345 aa)
RBM6RNA binding motif protein 6. (1120 aa)
PTBP1Polypyrimidine tract binding protein 1. (760 aa)
CCAR1Cell division cycle and apoptosis regulator 1. (1149 aa)
A0A4W2C1B0RRM domain-containing protein. (185 aa)
EWSR1EWS RNA binding protein 1. (1070 aa)
ZNF318Zinc finger protein 318. (2275 aa)
PABPN1LPoly(A) binding protein nuclear 1 like, cytoplasmic. (269 aa)
A0A4W2C7Q9Uncharacterized protein. (622 aa)
SREK1Splicing regulatory glutamic acid and lysine rich protein 1. (628 aa)
RBFOX3RNA binding fox-1 homolog 3. (416 aa)
TNPO1Transportin 1. (898 aa)
A0A4W2CCQ4Uncharacterized protein. (318 aa)
SYNCRIPSynaptotagmin binding cytoplasmic RNA interacting protein. (562 aa)
A0A4W2CGW0Uncharacterized protein. (102 aa)
PNISRPNN interacting serine and arginine rich protein. (814 aa)
U2AF2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (494 aa)
A0A4W2CQ28RRM domain-containing protein. (212 aa)
A0A4W2CVU9RRM domain-containing protein. (349 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U. (806 aa)
SRSF6Serine and arginine rich splicing factor 6. (345 aa)
A0A4W2CZU2Uncharacterized protein. (214 aa)
HNRNPA1Heterogeneous nuclear ribonucleoprotein A1. (373 aa)
PRPF40BPre-mRNA processing factor 40 homolog B. (915 aa)
RBM25RNA binding motif protein 25. (843 aa)
ELAVL1ELAV-like protein; Belongs to the RRM elav family. (347 aa)
HNRNPMHeterogeneous nuclear ribonucleoprotein M. (730 aa)
A0A4W2D3H4Uncharacterized protein. (231 aa)
A0A4W2D616RRM domain-containing protein. (282 aa)
A0A4W2D9G8Uncharacterized protein. (221 aa)
SRSF10Serine and arginine rich splicing factor 10. (262 aa)
A0A4W2DA51Uncharacterized protein. (357 aa)
SLTMSAFB like transcription modulator. (1031 aa)
YBX3Y-box binding protein 3. (352 aa)
HNRNPDLHeterogeneous nuclear ribonucleoprotein D like. (420 aa)
TRA2ATransformer 2 alpha homolog. (281 aa)
DHX36DEAH-box helicase 36. (1010 aa)
A0A4W2DFX9RRM domain-containing protein. (115 aa)
SRSF11Serine and arginine rich splicing factor 11. (482 aa)
A0A4W2DLL9RRM domain-containing protein. (311 aa)
PHAXPhosphorylated adaptor for RNA export. (394 aa)
RBM3RNA binding motif protein 3. (160 aa)
SRPK2SRSF protein kinase 2. (754 aa)
A0A4W2DRN1RRM domain-containing protein. (91 aa)
SRPK1SRSF protein kinase 1. (686 aa)
ILF2Interleukin enhancer binding factor 2. (390 aa)
A0A4W2E078RRM domain-containing protein. (154 aa)
SRSF3Serine and arginine rich splicing factor 3. (125 aa)
U2AF1Uncharacterized protein. (237 aa)
HNRNPFUncharacterized protein. (414 aa)
PRR3Proline rich 3. (187 aa)
A0A4W2E3F9Uncharacterized protein. (374 aa)
TPRG1LTumor protein p63 regulated 1 like. (273 aa)
A0A4W2EBS0Uncharacterized protein. (179 aa)
SRSF4Serine and arginine rich splicing factor 4. (493 aa)
A0A4W2ECL2Uncharacterized protein. (396 aa)
SRSF7Serine and arginine rich splicing factor 7. (235 aa)
RBM39RNA binding motif protein 39. (530 aa)
A0A4W2EF32Uncharacterized protein. (300 aa)
A0A4W2EFI8RRM domain-containing protein. (396 aa)
A0A4W2EGB2Uncharacterized protein. (364 aa)
NCBP1Nuclear cap binding protein subunit 1. (790 aa)
RALYRALY heterogeneous nuclear ribonucleoprotein. (331 aa)
HNRNPLHeterogeneous nuclear ribonucleoprotein L. (661 aa)
A0A4W2EMR3RRM domain-containing protein. (115 aa)
PCBP2Uncharacterized protein. (365 aa)
ZC2HC1CZinc finger C2HC-type containing 1C. (530 aa)
TRA2BTransformer 2 beta homolog. (288 aa)
SRSF5Serine and arginine rich splicing factor 5. (272 aa)
HNRNPKUncharacterized protein. (464 aa)
TTC14Tetratricopeptide repeat domain 14. (771 aa)
ZFC3H1Zinc finger C3H1-type containing. (1953 aa)
HNRNPA3Heterogeneous nuclear ribonucleoprotein A3. (380 aa)
HNRNPRHeterogeneous nuclear ribonucleoprotein R. (633 aa)
HNRNPH1Heterogeneous nuclear ribonucleoprotein H1. (482 aa)
A0A4W2EWI5Uncharacterized protein. (369 aa)
MATR3Uncharacterized protein. (864 aa)
SONSON DNA binding protein. (2455 aa)
A0A4W2F0M1Uncharacterized protein. (320 aa)
ILF3Interleukin enhancer binding factor 3. (895 aa)
A0A4W2F4L8Uncharacterized protein. (369 aa)
ELAVL3ELAV-like protein; Belongs to the RRM elav family. (367 aa)
A0A4W2F5F6Uncharacterized protein. (372 aa)
YBX1Y-box binding protein 1. (324 aa)
U2AF1L4Uncharacterized protein. (228 aa)
HNRNPUL2Uncharacterized protein. (749 aa)
SRRTSerrate, RNA effector molecule. (872 aa)
PRPF38BUncharacterized protein. (543 aa)
ELAVL4ELAV-like protein; Belongs to the RRM elav family. (402 aa)
HNRNPUL1Heterogeneous nuclear ribonucleoprotein U like 1. (769 aa)
HNRNPH3Heterogeneous nuclear ribonucleoprotein H3. (346 aa)
PRPF40APre-mRNA processing factor 40 homolog A. (929 aa)
HNRNPCRRM domain-containing protein. (307 aa)
HNRNPABHeterogeneous nuclear ribonucleoprotein A/B. (332 aa)
HNRNPLLHeterogeneous nuclear ribonucleoprotein L like. (536 aa)
SRSF1Uncharacterized protein. (248 aa)
SRSF9Uncharacterized protein. (221 aa)
A0A4W2H577RRM domain-containing protein. (100 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
PCBP1Poly(rC) binding protein 1. (328 aa)
LUC7L3LUC7 like 3 pre-mRNA splicing factor. (548 aa)
SRSF2RRM domain-containing protein. (221 aa)
SF1Splicing factor 1. (639 aa)
HNRNPA2B1Heterogeneous nuclear ribonucleoprotein A2/B1. (353 aa)
CELF1CUGBP Elav-like family member 1. (514 aa)
PRPF39Pre-mRNA processing factor 39. (667 aa)
RBM23RNA binding motif protein 23. (463 aa)
A0A4W2IEN8RRM domain-containing protein. (309 aa)
ELAVL2ELAV-like protein; Belongs to the RRM elav family. (405 aa)
PRPF4BPre-mRNA processing factor 4B. (1069 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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