13 items (Bos indicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A4W2BMG6	RRM domain-containing protein. (387 aa)
	A0A4W2CGW0	Uncharacterized protein. (102 aa)
	A0A4W2CQ28	RRM domain-containing protein. (212 aa)
	HNRNPU	Heterogeneous nuclear ribonucleoprotein U. (806 aa)
	HNRNPM	Heterogeneous nuclear ribonucleoprotein M. (730 aa)
	HNRNPF	Uncharacterized protein. (414 aa)
	A0A4W2E3F9	Uncharacterized protein. (374 aa)
	A0A4W2EFI8	RRM domain-containing protein. (396 aa)
	HNRNPL	Heterogeneous nuclear ribonucleoprotein L. (661 aa)
	HNRNPK	Uncharacterized protein. (464 aa)
	HNRNPR	Heterogeneous nuclear ribonucleoprotein R. (633 aa)
	HNRNPC	RRM domain-containing protein. (307 aa)
	HNRNPA2B1	Heterogeneous nuclear ribonucleoprotein A2/B1. (353 aa)

Your Current Organism:

Bos indicus

NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A4W2BMG6	A0A4W2CGW0	A0A4W2BMG6	A0A4W2CGW0	RRM domain-containing protein.	Uncharacterized protein.	0.684
A0A4W2BMG6	A0A4W2CQ28	A0A4W2BMG6	A0A4W2CQ28	RRM domain-containing protein.	RRM domain-containing protein.	0.881
A0A4W2BMG6	A0A4W2E3F9	A0A4W2BMG6	A0A4W2E3F9	RRM domain-containing protein.	Uncharacterized protein.	0.859
A0A4W2BMG6	HNRNPA2B1	A0A4W2BMG6	A0A4W2HT96	RRM domain-containing protein.	Heterogeneous nuclear ribonucleoprotein A2/B1.	0.475
A0A4W2BMG6	HNRNPC	A0A4W2BMG6	A0A4W2GGV6	RRM domain-containing protein.	RRM domain-containing protein.	0.693
A0A4W2BMG6	HNRNPF	A0A4W2BMG6	A0A4W2E1B9	RRM domain-containing protein.	Uncharacterized protein.	0.463
A0A4W2BMG6	HNRNPK	A0A4W2BMG6	A0A4W2ETK2	RRM domain-containing protein.	Uncharacterized protein.	0.871
A0A4W2BMG6	HNRNPL	A0A4W2BMG6	A0A4W2EJS1	RRM domain-containing protein.	Heterogeneous nuclear ribonucleoprotein L.	0.480
A0A4W2BMG6	HNRNPM	A0A4W2BMG6	A0A4W2D3B9	RRM domain-containing protein.	Heterogeneous nuclear ribonucleoprotein M.	0.881
A0A4W2BMG6	HNRNPR	A0A4W2BMG6	A0A4W2EW91	RRM domain-containing protein.	Heterogeneous nuclear ribonucleoprotein R.	0.452
A0A4W2BMG6	HNRNPU	A0A4W2BMG6	A0A4W2CVZ4	RRM domain-containing protein.	Heterogeneous nuclear ribonucleoprotein U.	0.849
A0A4W2CGW0	A0A4W2BMG6	A0A4W2CGW0	A0A4W2BMG6	Uncharacterized protein.	RRM domain-containing protein.	0.684
A0A4W2CGW0	A0A4W2CQ28	A0A4W2CGW0	A0A4W2CQ28	Uncharacterized protein.	RRM domain-containing protein.	0.801
A0A4W2CGW0	A0A4W2E3F9	A0A4W2CGW0	A0A4W2E3F9	Uncharacterized protein.	Uncharacterized protein.	0.835
A0A4W2CGW0	A0A4W2EFI8	A0A4W2CGW0	A0A4W2EFI8	Uncharacterized protein.	RRM domain-containing protein.	0.741
A0A4W2CGW0	HNRNPA2B1	A0A4W2CGW0	A0A4W2HT96	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein A2/B1.	0.583
A0A4W2CGW0	HNRNPF	A0A4W2CGW0	A0A4W2E1B9	Uncharacterized protein.	Uncharacterized protein.	0.463
A0A4W2CGW0	HNRNPK	A0A4W2CGW0	A0A4W2ETK2	Uncharacterized protein.	Uncharacterized protein.	0.835
A0A4W2CGW0	HNRNPL	A0A4W2CGW0	A0A4W2EJS1	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein L.	0.650
A0A4W2CGW0	HNRNPM	A0A4W2CGW0	A0A4W2D3B9	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein M.	0.801

page 1 of 8

Server load: low (24%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About