68 items (Bos indicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PDE6A	Phosphodiesterase. (859 aa)
	CERKL	Ceramide kinase like. (541 aa)
	PROM1	Prominin 1. (853 aa)
	GNAT2	G protein subunit alpha transducin 2. (354 aa)
	SPATA7	Spermatogenesis associated 7. (718 aa)
	IQCB1	IQ motif containing B1. (598 aa)
	GUCY2D	Guanylate cyclase. (1108 aa)
	RP1	RP1 axonemal microtubule associated. (2105 aa)
	RGS9	Regulator of G protein signaling 9. (639 aa)
	OPN1SW	Opsin 1, short wave sensitive. (349 aa)
	GNB1	G protein subunit beta 1. (358 aa)
	A0A4W2E716	Uncharacterized protein. (285 aa)
	IFT20	Intraflagellar transport 20. (156 aa)
	ATP8A2	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1188 aa)
	MAP1B	Microtubule associated protein 1B. (2463 aa)
	GNAT3	G protein subunit alpha transducin 3. (354 aa)
	RCVRN	Recoverin. (202 aa)
	VCAN	Versican. (3381 aa)
	IFT140	Intraflagellar transport 140. (1457 aa)
	ROM1	Retinal outer segment membrane protein 1. (351 aa)
	GNAT1	G protein subunit alpha transducin 1. (349 aa)
	CNGB3	Cyclic nucleotide gated channel subunit beta 3. (770 aa)
	RD3	Retinal degeneration 3, GUCY2D regulator. (195 aa)
	TMEM30A	Cell cycle control protein; Belongs to the CDC50/LEM3 family. (400 aa)
	GUCA1A	Uncharacterized protein. (205 aa)
	MAK	Male germ cell associated kinase. (648 aa)
	ARR3	Arrestin 3. (389 aa)
	RHO	Rhodopsin. (348 aa)
	GRK1	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (561 aa)
	PRKCA	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (672 aa)
	ATP1A4	Sodium/potassium-transporting ATPase subunit alpha. (1030 aa)
	GNA11	G protein subunit alpha 11. (359 aa)
	GNAQ	G protein subunit alpha q. (359 aa)
	PDE6H	Phosphodiesterase 6H. (83 aa)
	A0A4W2F478	Uncharacterized protein. (106 aa)
	TULP1	TUB like protein 1; Belongs to the TUB family. (586 aa)
	CRB1	Crumbs cell polarity complex component 1. (1408 aa)
	PRPH2	Peripherin 2. (346 aa)
	GUCA1B	Guanylate cyclase activator 1B. (204 aa)
	MYRIP	Myosin VIIA and Rab interacting protein. (854 aa)
	PDC	Phosducin. (245 aa)
	PDE6G	Phosphodiesterase 6G. (87 aa)
	IMPG1	Interphotoreceptor matrix proteoglycan 1. (776 aa)
	MYO7A	Myosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2116 aa)
	TMEM237	Transmembrane protein 237. (449 aa)
	STX3	Syntaxin 3; Belongs to the syntaxin family. (359 aa)
	PRCD	Photoreceptor disc component. (54 aa)
	HNF1A	HNF1 homeobox A. (633 aa)
	PDE6D	Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes. Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location. Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E. Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude. Stabilizes ARL3-GTP by decreasing the nucleotide [...] (150 aa)
	SLC24A4	Solute carrier family 24 member 4; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (622 aa)
	CNGB1	Cyclic nucleotide gated channel subunit beta 1. (937 aa)
	KIFAP3	Kinesin associated protein 3. (793 aa)
	RDH14	Retinol dehydrogenase 14; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (336 aa)
	RGS9BP	Regulator of G protein signaling 9 binding protein. (237 aa)
	ABCA4	ATP binding cassette subfamily A member 4. (2281 aa)
	RGR	Retinal G protein coupled receptor. (324 aa)
	PCARE	Photoreceptor cilium actin regulator. (1291 aa)
	MERTK	MER proto-oncogene, tyrosine kinase. (999 aa)
	BBS4	Bardet-Biedl syndrome 4. (519 aa)
	CDHR1	Cadherin related family member 1. (868 aa)
	LYAR	Ly1 antibody reactive. (382 aa)
	PDE6B	Phosphodiesterase. (853 aa)
	GNGT1	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (134 aa)
	SAG	S-antigen visual arrestin. (406 aa)
	CNGA1	Cyclic nucleotide gated channel subunit alpha 1. (694 aa)
	NXNL1	Nucleoredoxin like 1. (218 aa)
	RDH8	Retinol dehydrogenase 8; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (331 aa)
	CFAP410	LRRcap domain-containing protein. (256 aa)

Your Current Organism:

Bos indicus

NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A4W2E716	A0A4W2F478	A0A4W2E716	A0A4W2F478	Uncharacterized protein.	Uncharacterized protein.	0.434
A0A4W2E716	CNGA1	A0A4W2E716	A0A4W2D9Z7	Uncharacterized protein.	Cyclic nucleotide gated channel subunit alpha 1.	0.973
A0A4W2E716	CNGB1	A0A4W2E716	A0A4W2CT70	Uncharacterized protein.	Cyclic nucleotide gated channel subunit beta 1.	0.556
A0A4W2E716	CNGB3	A0A4W2E716	A0A4W2IIT0	Uncharacterized protein.	Cyclic nucleotide gated channel subunit beta 3.	0.510
A0A4W2E716	GNAT1	A0A4W2E716	A0A4W2BYZ6	Uncharacterized protein.	G protein subunit alpha transducin 1.	0.536
A0A4W2E716	GUCA1A	A0A4W2E716	A0A4W2HAS3	Uncharacterized protein.	Uncharacterized protein.	0.479
A0A4W2E716	GUCA1B	A0A4W2E716	A0A4W2C449	Uncharacterized protein.	Guanylate cyclase activator 1B.	0.451
A0A4W2E716	PDE6A	A0A4W2E716	A0A4W2F0I8	Uncharacterized protein.	Phosphodiesterase.	0.477
A0A4W2E716	PRPH2	A0A4W2E716	A0A4W2C3X4	Uncharacterized protein.	Peripherin 2.	0.497
A0A4W2E716	RGR	A0A4W2E716	A0A4W2CZJ0	Uncharacterized protein.	Retinal G protein coupled receptor.	0.515
A0A4W2E716	RGS9BP	A0A4W2E716	A0A4W2CWM6	Uncharacterized protein.	Regulator of G protein signaling 9 binding protein.	0.477
A0A4W2E716	RHO	A0A4W2E716	A0A4W2GU91	Uncharacterized protein.	Rhodopsin.	0.477
A0A4W2F478	A0A4W2E716	A0A4W2F478	A0A4W2E716	Uncharacterized protein.	Uncharacterized protein.	0.434
A0A4W2F478	CNGA1	A0A4W2F478	A0A4W2D9Z7	Uncharacterized protein.	Cyclic nucleotide gated channel subunit alpha 1.	0.513
A0A4W2F478	CNGB1	A0A4W2F478	A0A4W2CT70	Uncharacterized protein.	Cyclic nucleotide gated channel subunit beta 1.	0.437
A0A4W2F478	CNGB3	A0A4W2F478	A0A4W2IIT0	Uncharacterized protein.	Cyclic nucleotide gated channel subunit beta 3.	0.570
A0A4W2F478	GNAT2	A0A4W2F478	A0A4W2ERF6	Uncharacterized protein.	G protein subunit alpha transducin 2.	0.480
A0A4W2F478	GUCY2D	A0A4W2F478	A0A4W2EGX7	Uncharacterized protein.	Guanylate cyclase.	0.858
A0A4W2F478	PDE6H	A0A4W2F478	A0A4W2FDA6	Uncharacterized protein.	Phosphodiesterase 6H.	0.497
ABCA4	ATP8A2	A0A4W2CZG5	A0A4W2E483	ATP binding cassette subfamily A member 4.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.419

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