STRINGSTRING
IHH IHH NR2E3 NR2E3 GNGT1 GNGT1 THRB THRB NOTCH1 NOTCH1 PAX6 PAX6 TH TH DZANK1 DZANK1 STAT3 STAT3 RDH13 RDH13 RP1 RP1 SDK2 SDK2 GNAT2 GNAT2 NRL NRL PROM1 PROM1 AGTPBP1 AGTPBP1 HCN1 HCN1 FSCN2 FSCN2 TTC8 TTC8 NTRK2 NTRK2 PRDM1 PRDM1 NF2 NF2 PRKCI PRKCI SOX9 SOX9 SOX8 SOX8 A0A4W2BNE6 A0A4W2BNE6 ROM1 ROM1 USH1C USH1C THY1 THY1 MFRP MFRP CABP4 CABP4 GNAT1 GNAT1 TULP1 TULP1 CRB1 CRB1 PDE6C PDE6C RPGRIP1L RPGRIP1L NAGLU NAGLU BHLHE23 BHLHE23 CRB2 CRB2 RORB RORB RPGRIP1 RPGRIP1 BBS4 BBS4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
IHHHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (412 aa)
NR2E3Nuclear receptor subfamily 2 group E member 3. (322 aa)
GNGT1Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (134 aa)
THRBThyroid hormone receptor beta. (476 aa)
NOTCH1Notch receptor 1. (2533 aa)
PAX6Paired box 6. (455 aa)
THBH4_AAA_HYDROXYL_2 domain-containing protein. (536 aa)
DZANK1Double zinc ribbon and ankyrin repeat domains 1. (721 aa)
STAT3Signal transducer and activator of transcription. (770 aa)
RDH13Retinol dehydrogenase 13; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (335 aa)
RP1RP1 axonemal microtubule associated. (2105 aa)
SDK2Sidekick cell adhesion molecule 2. (2172 aa)
GNAT2G protein subunit alpha transducin 2. (354 aa)
NRLNeural retina leucine zipper. (236 aa)
PROM1Prominin 1. (853 aa)
AGTPBP1ATP/GTP binding protein 1. (1277 aa)
HCN1Hyperpolarization activated cyclic nucleotide gated potassium channel 1. (877 aa)
FSCN2Fascin. (492 aa)
TTC8Tetratricopeptide repeat domain 8. (501 aa)
NTRK2Tyrosine-protein kinase receptor. (837 aa)
PRDM1PR/SET domain 1. (842 aa)
NF2Neurofibromin 2. (596 aa)
PRKCIProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (636 aa)
SOX9SRY-box transcription factor 9. (524 aa)
SOX8SRY-box transcription factor 8. (534 aa)
A0A4W2BNE6BH4_AAA_HYDROXYL_2 domain-containing protein. (571 aa)
ROM1Retinal outer segment membrane protein 1. (351 aa)
USH1CUSH1 protein network component harmonin. (859 aa)
THY1Thy-1 cell surface antigen. (161 aa)
MFRPMembrane frizzled-related protein. (578 aa)
CABP4Calcium binding protein 4. (278 aa)
GNAT1G protein subunit alpha transducin 1. (349 aa)
TULP1TUB like protein 1; Belongs to the TUB family. (586 aa)
CRB1Crumbs cell polarity complex component 1. (1408 aa)
PDE6CPhosphodiesterase. (855 aa)
RPGRIP1LRPGRIP1 like. (1274 aa)
NAGLUN-acetyl-alpha-glucosaminidase. (741 aa)
BHLHE23Basic helix-loop-helix family member e23. (222 aa)
CRB2Crumbs cell polarity complex component 2. (1281 aa)
RORBRAR related orphan receptor B. (470 aa)
RPGRIP1RPGR interacting protein 1. (1243 aa)
BBS4Bardet-Biedl syndrome 4. (519 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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