STRINGSTRING
TNFAIP6 TNFAIP6 ITGB1 ITGB1 IGFBP3 IGFBP3 SSC5D SSC5D IGFBP6 IGFBP6 CTSK CTSK MFAP2 MFAP2 VEGFA VEGFA HSD17B12 HSD17B12 THBS1 THBS1 CCDC80 CCDC80 LRRC15 LRRC15 EPHA1 EPHA1 CTSL CTSL FSTL3 FSTL3 ITGAV ITGAV LOXL3 LOXL3 MYOC MYOC SDC4 SDC4 A0A4W2CEF6 A0A4W2CEF6 A0A4W2C2R3 A0A4W2C2R3 C6orf15 C6orf15 FBLN1 FBLN1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TNFAIP6TNF alpha induced protein 6. (298 aa)
ITGB1Integrin beta; Belongs to the integrin beta chain family. (801 aa)
IGFBP3Insulin like growth factor binding protein 3. (291 aa)
SSC5DScavenger receptor cysteine rich family member with 5 domains. (1693 aa)
IGFBP6Insulin like growth factor binding protein 6. (237 aa)
CTSKCathepsin K; Belongs to the peptidase C1 family. (334 aa)
MFAP2Microfibril associated protein 2. (267 aa)
VEGFAVascular endothelial growth factor A; Belongs to the PDGF/VEGF growth factor family. (394 aa)
HSD17B12Hydroxysteroid 17-beta dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (370 aa)
THBS1Thrombospondin 1. (1170 aa)
CCDC80Coiled-coil domain containing 80. (954 aa)
LRRC15Leucine rich repeat containing 15. (584 aa)
EPHA1EPH receptor A1. (1076 aa)
CTSLCathepsin L; Belongs to the peptidase C1 family. (367 aa)
FSTL3Follistatin like 3. (378 aa)
ITGAVIntegrin subunit alpha V; Belongs to the integrin alpha chain family. (1048 aa)
LOXL3Lysyl oxidase like 3. (752 aa)
MYOCMyocilin. (490 aa)
SDC4Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (218 aa)
A0A4W2CEF6Integrin beta; Belongs to the integrin beta chain family. (784 aa)
A0A4W2C2R3Uncharacterized protein. (307 aa)
C6orf15Chromosome 6 open reading frame 15. (295 aa)
FBLN1Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes. (711 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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