STRINGSTRING
CLN3 CLN3 UMOD UMOD TRPV1 TRPV1 CHRNB4 CHRNB4 SLC22A6 SLC22A6 MLLT6 MLLT6 ATP6V1B1 ATP6V1B1 ABCG2 ABCG2 ATP6V0A4 ATP6V0A4 EDNRB EDNRB KCNMA1 KCNMA1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CLN3Battenin. (460 aa)
UMODUromodulin. (643 aa)
TRPV1Transient receptor potential cation channel subfamily V member 1; Belongs to the transient receptor (TC 1.A.4) family. (837 aa)
CHRNB4Cholinergic receptor nicotinic beta 4 subunit. (510 aa)
SLC22A6Solute carrier family 22 member 6. (550 aa)
MLLT6MLLT6, PHD finger containing. (1095 aa)
ATP6V1B1Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family. (513 aa)
ABCG2ATP binding cassette subfamily G member 2 (Junior blood group). (658 aa)
ATP6V0A4V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (834 aa)
EDNRBEndothelin receptor type B; Belongs to the G-protein coupled receptor 1 family. (441 aa)
KCNMA1Potassium calcium-activated channel subfamily M alpha 1. (1276 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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