STRINGSTRING
OPN4 OPN4 CNGB1 CNGB1 SLC24A4 SLC24A4 AIPL1 AIPL1 PDE6C PDE6C GNAT1 GNAT1 CABP4 CABP4 ASIC2 ASIC2 DHRS12 DHRS12 RHO RHO OPN5 OPN5 GUCA1A GUCA1A GPR88 GPR88 GNA11 GNA11 A0A4W2ESW2 A0A4W2ESW2 GNAT2 GNAT2 OPN1SW OPN1SW A0A4W2E716 A0A4W2E716 GNAQ GNAQ RCVRN RCVRN GNGT1 GNGT1 RGR RGR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OPN4Opsin 4. (478 aa)
CNGB1Cyclic nucleotide gated channel subunit beta 1. (937 aa)
SLC24A4Solute carrier family 24 member 4; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (622 aa)
AIPL1Aryl hydrocarbon receptor interacting protein like 1. (328 aa)
PDE6CPhosphodiesterase. (855 aa)
GNAT1G protein subunit alpha transducin 1. (349 aa)
CABP4Calcium binding protein 4. (278 aa)
ASIC2Acid sensing ion channel subunit 2; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (565 aa)
DHRS12Dehydrogenase/reductase 12. (376 aa)
RHORhodopsin. (348 aa)
OPN5Opsin 5; Belongs to the G-protein coupled receptor 1 family. (355 aa)
GUCA1AUncharacterized protein. (205 aa)
GPR88G protein-coupled receptor 88. (383 aa)
GNA11G protein subunit alpha 11. (359 aa)
A0A4W2ESW2Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (459 aa)
GNAT2G protein subunit alpha transducin 2. (354 aa)
OPN1SWOpsin 1, short wave sensitive. (349 aa)
A0A4W2E716Uncharacterized protein. (285 aa)
GNAQG protein subunit alpha q. (359 aa)
RCVRNRecoverin. (202 aa)
GNGT1Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (134 aa)
RGRRetinal G protein coupled receptor. (324 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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