STRINGSTRING
CARMIL1 CARMIL1 NCK1 NCK1 RHOD RHOD WASF2 WASF2 CYFIP1 CYFIP1 VAV3 VAV3 S1PR1 S1PR1 VAV2 VAV2 PTPRO PTPRO SH2B1 SH2B1 ABLIM3 ABLIM3 CAPZB CAPZB KIT KIT ARHGEF7 ARHGEF7 DMTN DMTN SPEF1 SPEF1 ABLIM2 ABLIM2 AJUBA AJUBA CCDC88A CCDC88A NUP85 NUP85 LOC113884473 LOC113884473 SPATA13 SPATA13 CDH13 CDH13 PARVB PARVB VCL VCL ABLIM1 ABLIM1 WASF3 WASF3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CARMIL1Capping protein regulator and myosin 1 linker 1. (1426 aa)
NCK1Cytoplasmic protein. (377 aa)
RHODRas homolog family member D. (210 aa)
WASF2WASP family member 2. (493 aa)
CYFIP1Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. (1253 aa)
VAV3Vav guanine nucleotide exchange factor 3. (977 aa)
S1PR1Sphingosine-1-phosphate receptor 1; Belongs to the G-protein coupled receptor 1 family. (382 aa)
VAV2Vav guanine nucleotide exchange factor 2. (878 aa)
PTPROProtein tyrosine phosphatase receptor type O. (1216 aa)
SH2B1SH2B adaptor protein 1. (860 aa)
ABLIM3Actin binding LIM protein family member 3. (683 aa)
CAPZBF-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (306 aa)
KITMast/stem cell growth factor receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (977 aa)
ARHGEF7Rho guanine nucleotide exchange factor 7. (862 aa)
DMTNDematin actin binding protein. (467 aa)
SPEF1Sperm flagellar 1. (236 aa)
ABLIM2Actin binding LIM protein family member 2. (701 aa)
AJUBAAjuba LIM protein. (564 aa)
CCDC88ACoiled-coil domain containing 88A. (1842 aa)
NUP85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (656 aa)
LOC113884473CH_2 domain-containing protein. (271 aa)
SPATA13Uncharacterized protein. (1260 aa)
CDH13Cadherin 13. (713 aa)
PARVBParvin beta. (365 aa)
VCLVinculin. (1134 aa)
ABLIM1Actin binding LIM protein 1. (835 aa)
WASF3WASP family member 3. (501 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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