STRINGSTRING
ADAMTS3 ADAMTS3 SERPINH1 SERPINH1 ADAMTS2 ADAMTS2 COL5A1 COL5A1 P3H3 P3H3 TRAM2 TRAM2 COL1A1 COL1A1 RCN3 RCN3 P3H4 P3H4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADAMTS3ADAM metallopeptidase with thrombospondin type 1 motif 3. (1207 aa)
SERPINH1Serpin family H member 1; Belongs to the serpin family. (418 aa)
ADAMTS2ADAM metallopeptidase with thrombospondin type 1 motif 2. (1205 aa)
COL5A1Collagen type V alpha 1 chain. (1847 aa)
P3H3Prolyl 3-hydroxylase 3. (751 aa)
TRAM2Translocating chain-associated membrane protein; Belongs to the TRAM family. (370 aa)
COL1A1Collagen type I alpha 1 chain. (1584 aa)
RCN3Reticulocalbin 3. (328 aa)
P3H4Prolyl 3-hydroxylase family member 4 (non-enzymatic). (442 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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