28 items (Bos indicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Your Input:
	TAF5	TATA-box binding protein associated factor 5. (800 aa)
	SUPT3H	SPT3 homolog, SAGA and STAGA complex component. (438 aa)
	TAF6	TATA-box binding protein associated factor 6. (740 aa)
	SUPT20H	SPT20 homolog, SAGA complex component. (816 aa)
	TAF9	TATA-box binding protein associated factor 9. (264 aa)
	A0A4W2CJR6	TFIID_20kDa domain-containing protein. (152 aa)
	TAF12	TFIID_20kDa domain-containing protein. (161 aa)
	SUPT7L	SPT7 like, STAGA complex gamma subunit. (412 aa)
	ASXL1	ASXL transcriptional regulator 1. (1535 aa)
	MYSM1	Myb like, SWIRM and MPN domains 1. (867 aa)
	ATXN7L1	Ataxin 7 like 1. (993 aa)
	ATXN7	SCA7 domain-containing protein. (886 aa)
	KAT2A	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (837 aa)
	SGF29	SAGA complex associated factor 29. (293 aa)
	ATXN7L3	Ataxin-7-like protein 3; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for transcription. Required for nuclear receptor-mediated transactivation. Within the complex, it is required to recruit USP22 and EN [...] (354 aa)
	SF3B3	Splicing factor 3b subunit 3. (1217 aa)
	TAF10	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (218 aa)
	USP22	Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (480 aa)
	ATXN7L2	Ataxin 7 like 2. (784 aa)
	SF3B5	Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
	USP16	Ubiquitin carboxyl-terminal hydrolase 16; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. (827 aa)
	TAF2	TATA-box binding protein associated factor 2. (1251 aa)
	TADA3	Transcriptional adaptor 3. (432 aa)
	BAP1	Ubiquitin carboxyl-terminal hydrolase. (729 aa)
	TAF6L	TATA-box binding protein associated factor 6 like. (665 aa)
	ENY2	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for trans [...] (101 aa)
	TAF4	TATA-box binding protein associated factor 4. (1061 aa)
	TADA1	Transcriptional adaptor 1. (335 aa)

Your Current Organism:

Bos indicus

NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A4W2CJR6	ATXN7	A0A4W2CJR6	A0A4W2DQK5	TFIID_20kDa domain-containing protein.	SCA7 domain-containing protein.	0.850
A0A4W2CJR6	ATXN7L1	A0A4W2CJR6	A0A4W2DPJ3	TFIID_20kDa domain-containing protein.	Ataxin 7 like 1.	0.785
A0A4W2CJR6	ATXN7L2	A0A4W2CJR6	A0A4W2FWB2	TFIID_20kDa domain-containing protein.	Ataxin 7 like 2.	0.785
A0A4W2CJR6	ATXN7L3	A0A4W2CJR6	A0A4W2E953	TFIID_20kDa domain-containing protein.	Ataxin-7-like protein 3; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for transcription. Required for nuclear receptor-mediated transactivation. Within the complex, it is required to recruit USP22 and EN [...]	0.868
A0A4W2CJR6	ENY2	A0A4W2CJR6	A0A4W2HWZ8	TFIID_20kDa domain-containing protein.	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for trans [...]	0.875
A0A4W2CJR6	KAT2A	A0A4W2CJR6	A0A4W2E363	TFIID_20kDa domain-containing protein.	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	0.795
A0A4W2CJR6	SF3B3	A0A4W2CJR6	A0A4W2EAD7	TFIID_20kDa domain-containing protein.	Splicing factor 3b subunit 3.	0.633
A0A4W2CJR6	SF3B5	A0A4W2CJR6	A0A4W2GVG0	TFIID_20kDa domain-containing protein.	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	0.804
A0A4W2CJR6	SGF29	A0A4W2CJR6	A0A4W2E7S8	TFIID_20kDa domain-containing protein.	SAGA complex associated factor 29.	0.918
A0A4W2CJR6	SUPT20H	A0A4W2CJR6	A0A4W2C4W6	TFIID_20kDa domain-containing protein.	SPT20 homolog, SAGA complex component.	0.893
A0A4W2CJR6	SUPT3H	A0A4W2CJR6	A0A4W2BZV3	TFIID_20kDa domain-containing protein.	SPT3 homolog, SAGA and STAGA complex component.	0.916
A0A4W2CJR6	SUPT7L	A0A4W2CJR6	A0A4W2CXP4	TFIID_20kDa domain-containing protein.	SPT7 like, STAGA complex gamma subunit.	0.902
A0A4W2CJR6	TADA1	A0A4W2CJR6	A0A4W2I858	TFIID_20kDa domain-containing protein.	Transcriptional adaptor 1.	0.831
A0A4W2CJR6	TADA3	A0A4W2CJR6	A0A4W2H485	TFIID_20kDa domain-containing protein.	Transcriptional adaptor 3.	0.898
A0A4W2CJR6	TAF10	A0A4W2CJR6	A0A4W2EKG6	TFIID_20kDa domain-containing protein.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.989
A0A4W2CJR6	TAF2	A0A4W2CJR6	A0A4W2H1X1	TFIID_20kDa domain-containing protein.	TATA-box binding protein associated factor 2.	0.986
A0A4W2CJR6	TAF4	A0A4W2CJR6	A0A4W2I5M9	TFIID_20kDa domain-containing protein.	TATA-box binding protein associated factor 4.	0.991
A0A4W2CJR6	TAF5	A0A4W2CJR6	A0A4W2FW37	TFIID_20kDa domain-containing protein.	TATA-box binding protein associated factor 5.	0.988
A0A4W2CJR6	TAF6	A0A4W2CJR6	A0A4W2C2B0	TFIID_20kDa domain-containing protein.	TATA-box binding protein associated factor 6.	0.989
A0A4W2CJR6	TAF6L	A0A4W2CJR6	A0A4W2HMP3	TFIID_20kDa domain-containing protein.	TATA-box binding protein associated factor 6 like.	0.952

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