STRINGSTRING
IFT140 IFT140 ROM1 ROM1 CRB1 CRB1 PRPH2 PRPH2 CNGB1 CNGB1 PCARE PCARE BBS4 BBS4 CDHR1 CDHR1 IFT20 IFT20 A0A4W2E716 A0A4W2E716 RP1 RP1 MFSD2A MFSD2A AHI1 AHI1 NPHP4 NPHP4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
IFT140Intraflagellar transport 140. (1457 aa)
ROM1Retinal outer segment membrane protein 1. (351 aa)
CRB1Crumbs cell polarity complex component 1. (1408 aa)
PRPH2Peripherin 2. (346 aa)
CNGB1Cyclic nucleotide gated channel subunit beta 1. (937 aa)
PCAREPhotoreceptor cilium actin regulator. (1291 aa)
BBS4Bardet-Biedl syndrome 4. (519 aa)
CDHR1Cadherin related family member 1. (868 aa)
IFT20Intraflagellar transport 20. (156 aa)
A0A4W2E716Uncharacterized protein. (285 aa)
RP1RP1 axonemal microtubule associated. (2105 aa)
MFSD2AMajor facilitator superfamily domain containing 2A. (537 aa)
AHI1Abelson helper integration site 1. (1163 aa)
NPHP4Nephrocystin 4. (1431 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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