STRINGSTRING
SCMH1 SCMH1 KDM3A KDM3A AIRE AIRE MORC1 MORC1 MARCKS MARCKS SPATA24 SPATA24 ACTRT3 ACTRT3 ANKRD37 ANKRD37 TBPL1 TBPL1 CDK2 CDK2 CDK7 CDK7 TP53 TP53 CELF1 CELF1 TAF4 TAF4 DNMT1 DNMT1 LHX8 LHX8 TERF2 TERF2 SMARCC1 SMARCC1 TERF2IP TERF2IP TESMIN TESMIN YAP1 YAP1 GTF2A1L GTF2A1L SLC2A1 SLC2A1 ANKRD17 ANKRD17 KPNA7 KPNA7 STAG3 STAG3 MAEL MAEL ACTL7A ACTL7A LIMK1 LIMK1 TOP2A TOP2A ZBTB16 ZBTB16 TRIM24 TRIM24 RAD51 RAD51 STRA8 STRA8 AURKB AURKB TAF3 TAF3 SPAG8 SPAG8 TAF10 TAF10 TNP1 TNP1 SMARCB1 SMARCB1 MLH3 MLH3 REC8 REC8 PATZ1 PATZ1 ZMYND15 ZMYND15 CTCF CTCF TRIP13 TRIP13 STPG4 STPG4 NLRP5 NLRP5 ZFPM2 ZFPM2 TCFL5 TCFL5 DMRT1 DMRT1 TOPBP1 TOPBP1 HSPA2 HSPA2 PCNA PCNA SYCP1 SYCP1 DAZAP1 DAZAP1 AURKA AURKA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SCMH1Scm polycomb group protein homolog 1. (653 aa)
KDM3ALysine demethylase 3A. (1340 aa)
AIREAutoimmune regulator. (565 aa)
MORC1MORC family CW-type zinc finger 1. (725 aa)
MARCKSMyristoylated alanine rich protein kinase C substrate. (333 aa)
SPATA24Spermatogenesis associated 24. (205 aa)
ACTRT3Actin related protein T3; Belongs to the actin family. (439 aa)
ANKRD37Ankyrin repeat domain 37. (158 aa)
TBPL1TATA-box binding protein like 1. (186 aa)
CDK2Cyclin dependent kinase 2; Belongs to the protein kinase superfamily. (346 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (346 aa)
TP53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (499 aa)
CELF1CUGBP Elav-like family member 1. (514 aa)
TAF4TATA-box binding protein associated factor 4. (1061 aa)
DNMT1DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1708 aa)
LHX8LIM homeobox 8. (346 aa)
TERF2Telomeric repeat binding factor 2. (543 aa)
SMARCC1SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1. (1105 aa)
TERF2IPTERF2 interacting protein. (399 aa)
TESMINTestis expressed metallothionein like protein. (511 aa)
YAP1Yes associated protein 1. (507 aa)
GTF2A1LGeneral transcription factor IIA subunit 1 like. (476 aa)
SLC2A1Solute carrier family 2 member 1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (530 aa)
ANKRD17Ankyrin repeat domain 17. (2586 aa)
KPNA7Importin subunit alpha; Functions in nuclear protein import. (522 aa)
STAG3Stromal antigen 3. (1362 aa)
MAELMaelstrom spermatogenic transposon silencer. (427 aa)
ACTL7AActin like 7A; Belongs to the actin family. (438 aa)
LIMK1LIM domain kinase 1. (778 aa)
TOP2ADNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1532 aa)
ZBTB16Zinc finger and BTB domain containing 16. (810 aa)
TRIM24Tripartite motif containing 24. (1016 aa)
RAD51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
STRA8Uncharacterized protein. (450 aa)
AURKBAurora kinase B; Belongs to the protein kinase superfamily. (406 aa)
TAF3TATA-box binding protein associated factor 3. (932 aa)
SPAG8Sperm associated antigen 8. (484 aa)
TAF10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (218 aa)
TNP1Transition protein 1. (55 aa)
SMARCB1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (436 aa)
MLH3MutL homolog 3. (1514 aa)
REC8REC8 meiotic recombination protein. (579 aa)
PATZ1POZ/BTB and AT hook containing zinc finger 1. (687 aa)
ZMYND15Zinc finger MYND-type containing 15. (701 aa)
CTCFCCCTC-binding factor. (727 aa)
TRIP13Thyroid hormone receptor interactor 13; Belongs to the AAA ATPase family. (436 aa)
STPG4Sperm-tail PG-rich repeat containing 4. (244 aa)
NLRP5NLR family pyrin domain containing 5. (1098 aa)
ZFPM2Zinc finger protein, FOG family member 2. (1151 aa)
TCFL5Transcription factor like 5. (506 aa)
DMRT1Doublesex and mab-3 related transcription factor 1. (355 aa)
TOPBP1DNA topoisomerase II binding protein 1. (1521 aa)
HSPA2Heat shock protein family A (Hsp70) member 2; Belongs to the heat shock protein 70 family. (636 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (326 aa)
SYCP1Synaptonemal complex protein 1. (980 aa)
DAZAP1DAZ associated protein 1. (406 aa)
AURKAAurora kinase A; Belongs to the protein kinase superfamily. (402 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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