STRINGSTRING
SMARCA4 SMARCA4 C17orf64 C17orf64 EP300 EP300 A0A4W2CIJ2 A0A4W2CIJ2 CHD1 CHD1 ZNF639 ZNF639 LEF1 LEF1 HPN HPN SMARCB1 SMARCB1 SP1 SP1 SNW1 SNW1 RRP1B RRP1B TFAP4 TFAP4 TAF11 TAF11 CDK9 CDK9 CCNT1 CCNT1 JUN JUN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMARCA4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4. (1639 aa)
C17orf64Chromosome 17 open reading frame 64. (234 aa)
EP300E1A binding protein p300. (2411 aa)
A0A4W2CIJ2Uncharacterized protein. (164 aa)
CHD1Chromodomain helicase DNA binding protein 1. (1710 aa)
ZNF639Zinc finger protein 639. (485 aa)
LEF1Lymphoid enhancer binding factor 1. (430 aa)
HPNHepsin; Belongs to the peptidase S1 family. (454 aa)
SMARCB1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (436 aa)
SP1Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1209 aa)
SNW1SNW domain containing 1. (536 aa)
RRP1BRibosomal RNA processing 1B. (737 aa)
TFAP4Transcription factor AP-4. (335 aa)
TAF11TATA-box binding protein associated factor 11. (210 aa)
CDK9Cyclin dependent kinase 9; Belongs to the protein kinase superfamily. (494 aa)
CCNT1Cyclin T1; Belongs to the cyclin family. (727 aa)
JUNJun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (335 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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