STRINGSTRING
TARBP2 TARBP2 PCBP2 PCBP2 DHX58 DHX58 SEC14L1 SEC14L1 A0A4W2H902 A0A4W2H902 ATG5 ATG5 RIOK3 RIOK3 NLRX1 NLRX1 GPATCH3 GPATCH3 RNF125 RNF125 MUL1 MUL1 A0A4W2CCQ4 A0A4W2CCQ4 ITCH ITCH TRAF3IP1 TRAF3IP1 ATG12 ATG12 PPM1B PPM1B UFD1 UFD1 FGL2 FGL2 TKFC TKFC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TARBP2RISC-loading complex subunit TARBP2; Required for formation of the RNA induced silencing complex (RISC). Component of the RISC loading complex (RLC), also known as the micro-RNA (miRNA) loading complex (miRLC), which is composed of DICER1, AGO2 and TARBP2. Within the RLC/miRLC, DICER1 and TARBP2 are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto AGO2. AGO2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from DICER1 and TARBP2. May also play a role in the production of short interfering RNAs (siRNAs) from [...] (376 aa)
PCBP2Uncharacterized protein. (365 aa)
DHX58DExH-box helicase 58. (680 aa)
SEC14L1SEC14 like lipid binding 1. (719 aa)
A0A4W2H902Uncharacterized protein. (134 aa)
ATG5Autophagy protein 5; Involved in autophagic vesicle formation. (214 aa)
RIOK3Serine/threonine-protein kinase RIO3; Involved in regulation of type I interferon (IFN)-dependent immune response which plays a critical role in the innate immune response against DNA and RNA viruses. (519 aa)
NLRX1NLR family member X1. (990 aa)
GPATCH3G-patch domain containing 3. (569 aa)
RNF125Ring finger protein 125. (234 aa)
MUL1Mitochondrial E3 ubiquitin protein ligase 1. (350 aa)
A0A4W2CCQ4Uncharacterized protein. (318 aa)
ITCHE3 ubiquitin-protein ligase. (862 aa)
TRAF3IP1TRAF3 interacting protein 1. (620 aa)
ATG12Uncharacterized protein. (266 aa)
PPM1BPPM-type phosphatase domain-containing protein. (479 aa)
UFD1Ubiquitin recognition factor in ER associated degradation 1. (307 aa)
FGL2Fibrinogen like 2. (441 aa)
TKFCTriokinase and FMN cyclase. (594 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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