STRINGSTRING
ZHX2 ZHX2 CHD7 CHD7 NR2E1 NR2E1 NAGLU NAGLU CALB1 CALB1 TCIRG1 TCIRG1 SDK1 SDK1 RPGRIP1L RPGRIP1L PDE6C PDE6C IGFN1 IGFN1 PRPH2 PRPH2 CRB1 CRB1 MYPN MYPN POU4F2 POU4F2 TULP1 TULP1 GNAT1 GNAT1 TFAP2B TFAP2B LAMB2 LAMB2 ATOH7 ATOH7 NECTIN1 NECTIN1 CABP4 CABP4 FAT3 FAT3 MFRP MFRP THY1 THY1 USH1C USH1C PTPRM PTPRM LAMA1 LAMA1 ROM1 ROM1 ACHE ACHE SOX9 SOX9 AHI1 AHI1 RD3 RD3 RPE65 RPE65 LHX2 LHX2 FZD4 FZD4 GDF11 GDF11 FJX1 FJX1 NF2 NF2 HIF1A HIF1A ZNF513 ZNF513 CLIC4 CLIC4 SMARCA4 SMARCA4 RHO RHO LHX1 LHX1 CLN8 CLN8 TSPAN12 TSPAN12 NTRK2 NTRK2 TTC8 TTC8 RPL24 RPL24 NEUROD4 NEUROD4 HCN1 HCN1 PDGFRA PDGFRA JMJD6 JMJD6 IMPG2 IMPG2 DSCAM DSCAM PDE6A PDE6A GRM6 GRM6 MFSD2A MFSD2A A0A4W2EUH7 A0A4W2EUH7 AGTPBP1 AGTPBP1 NEUROD1 NEUROD1 HIPK1 HIPK1 PROM1 PROM1 NRL NRL GNAT2 GNAT2 VSTM4 VSTM4 MAN2A1 MAN2A1 HIPK2 HIPK2 MDM1 MDM1 COL4A1 COL4A1 ARHGEF15 ARHGEF15 CYP1B1 CYP1B1 SCAPER SCAPER SDK2 SDK2 CDON CDON SOX8 SOX8 RP1 RP1 BMPR2 BMPR2 RDH13 RDH13 LAMC3 LAMC3 STAT3 STAT3 NPHP4 NPHP4 GNB1 GNB1 PAX6 PAX6 GPM6A GPM6A FOXN4 FOXN4 PROX1 PROX1 NOTCH1 NOTCH1 THRB THRB MED1 MED1 LRP5 LRP5 MEGF11 MEGF11 CLCN2 CLCN2 HES1 HES1 BMPR1B BMPR1B A0A4W2DBA5 A0A4W2DBA5 A0A4W2DBA0 A0A4W2DBA0 RHOJ RHOJ SMARCD3 SMARCD3 NR2E3 NR2E3 ACTL6A ACTL6A PDE6B PDE6B PFDN5 PFDN5 BBS4 BBS4 MERTK MERTK BARHL2 BARHL2 TGIF2 TGIF2 PTF1A PTF1A RPGRIP1 RPGRIP1 DLL1 DLL1 LPCAT1 LPCAT1 ACVRL1 ACVRL1 A0A4W2CYM1 A0A4W2CYM1 RORB RORB TBC1D32 TBC1D32 CRB2 CRB2 BHLHE23 BHLHE23 IHH IHH VSX1 VSX1 SLC4A5 SLC4A5 VAX2 VAX2 TUB TUB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ZHX2Zinc fingers and homeoboxes 2. (838 aa)
CHD7Chromodomain helicase DNA binding protein 7. (2990 aa)
NR2E1Nuclear receptor subfamily 2 group E member 1. (385 aa)
NAGLUN-acetyl-alpha-glucosaminidase. (741 aa)
CALB1Calbindin 1. (236 aa)
TCIRG1V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (830 aa)
SDK1Sidekick cell adhesion molecule 1. (2171 aa)
RPGRIP1LRPGRIP1 like. (1274 aa)
PDE6CPhosphodiesterase. (855 aa)
IGFN1Uncharacterized protein. (1255 aa)
PRPH2Peripherin 2. (346 aa)
CRB1Crumbs cell polarity complex component 1. (1408 aa)
MYPNMyopalladin. (1320 aa)
POU4F2POU domain protein. (408 aa)
TULP1TUB like protein 1; Belongs to the TUB family. (586 aa)
GNAT1G protein subunit alpha transducin 1. (349 aa)
TFAP2BTranscription factor AP-2 beta. (488 aa)
LAMB2Laminin subunit beta 2. (1802 aa)
ATOH7Atonal bHLH transcription factor 7. (152 aa)
NECTIN1Nectin cell adhesion molecule 1. (513 aa)
CABP4Calcium binding protein 4. (278 aa)
FAT3FAT atypical cadherin 3. (4555 aa)
MFRPMembrane frizzled-related protein. (578 aa)
THY1Thy-1 cell surface antigen. (161 aa)
USH1CUSH1 protein network component harmonin. (859 aa)
PTPRMProtein tyrosine phosphatase receptor type M. (1497 aa)
LAMA1Laminin subunit alpha 1. (3131 aa)
ROM1Retinal outer segment membrane protein 1. (351 aa)
ACHECarboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (615 aa)
SOX9SRY-box transcription factor 9. (524 aa)
AHI1Abelson helper integration site 1. (1163 aa)
RD3Retinal degeneration 3, GUCY2D regulator. (195 aa)
RPE65Retinoid isomerohydrolase RPE65. (533 aa)
LHX2LIM homeobox 2. (406 aa)
FZD4Frizzled class receptor 4; Belongs to the G-protein coupled receptor Fz/Smo family. (537 aa)
GDF11Growth differentiation factor 11. (406 aa)
FJX1Four-jointed box kinase 1. (437 aa)
NF2Neurofibromin 2. (596 aa)
HIF1AHypoxia inducible factor 1 subunit alpha. (842 aa)
ZNF513Zinc finger protein 513. (542 aa)
CLIC4Chloride intracellular channel protein; Belongs to the chloride channel CLIC family. (253 aa)
SMARCA4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4. (1639 aa)
RHORhodopsin. (348 aa)
LHX1LIM homeobox 1. (406 aa)
CLN8CLN8 transmembrane ER and ERGIC protein. (339 aa)
TSPAN12Tetraspanin. (305 aa)
NTRK2Tyrosine-protein kinase receptor. (837 aa)
TTC8Tetratricopeptide repeat domain 8. (501 aa)
RPL24Ribosomal protein L24. (157 aa)
NEUROD4Neurogenic differentiation factor. (330 aa)
HCN1Hyperpolarization activated cyclic nucleotide gated potassium channel 1. (877 aa)
PDGFRAPlatelet-derived growth factor receptor alpha; Tyrosine-protein kinase that acts as a cell-surface receptor for PDGFA, PDGFB and PDGFC and plays an essential role in the regulation of embryonic development, cell proliferation, survival and chemotaxis. Depending on the context, promotes or inhibits cell proliferation and cell migration. Plays an important role in the differentiation of bone marrow-derived mesenchymal stem cells. Required for normal skeleton development. (1098 aa)
JMJD6Jumonji domain containing 6, arginine demethylase and lysine hydroxylase. (414 aa)
IMPG2Interphotoreceptor matrix proteoglycan 2. (1265 aa)
DSCAMDS cell adhesion molecule. (2012 aa)
PDE6APhosphodiesterase. (859 aa)
GRM6Glutamate metabotropic receptor 6. (871 aa)
MFSD2AMajor facilitator superfamily domain containing 2A. (537 aa)
A0A4W2EUH7Uncharacterized protein. (5571 aa)
AGTPBP1ATP/GTP binding protein 1. (1277 aa)
NEUROD1Neurogenic differentiation factor. (356 aa)
HIPK1Homeodomain interacting protein kinase 1. (1233 aa)
PROM1Prominin 1. (853 aa)
NRLNeural retina leucine zipper. (236 aa)
GNAT2G protein subunit alpha transducin 2. (354 aa)
VSTM4V-set and transmembrane domain containing 4. (319 aa)
MAN2A1Alpha-mannosidase. (1181 aa)
HIPK2Homeodomain interacting protein kinase 2. (1205 aa)
MDM1Mdm1 nuclear protein. (724 aa)
COL4A1Collagen type IV alpha 1 chain. (1669 aa)
ARHGEF15Rho guanine nucleotide exchange factor 15. (847 aa)
CYP1B1Cytochrome P450 family 1 subfamily B member 1; Belongs to the cytochrome P450 family. (539 aa)
SCAPERS-phase cyclin A associated protein in the ER. (1400 aa)
SDK2Sidekick cell adhesion molecule 2. (2172 aa)
CDONCell adhesion associated, oncogene regulated. (1247 aa)
SOX8SRY-box transcription factor 8. (534 aa)
RP1RP1 axonemal microtubule associated. (2105 aa)
BMPR2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1038 aa)
RDH13Retinol dehydrogenase 13; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (335 aa)
LAMC3Laminin subunit gamma 3. (1577 aa)
STAT3Signal transducer and activator of transcription. (770 aa)
NPHP4Nephrocystin 4. (1431 aa)
GNB1G protein subunit beta 1. (358 aa)
PAX6Paired box 6. (455 aa)
GPM6AGlycoprotein M6A. (317 aa)
FOXN4Forkhead box N4. (546 aa)
PROX1Prospero homeobox 1. (738 aa)
NOTCH1Notch receptor 1. (2533 aa)
THRBThyroid hormone receptor beta. (476 aa)
MED1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1575 aa)
LRP5Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family. (1629 aa)
MEGF11Multiple EGF like domains 11. (1151 aa)
CLCN2Chloride channel protein. (911 aa)
HES1Hes family bHLH transcription factor 1. (280 aa)
BMPR1BSerine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (526 aa)
A0A4W2DBA5Uncharacterized protein. (563 aa)
A0A4W2DBA0Uncharacterized protein. (699 aa)
RHOJRas homolog family member J. (236 aa)
SMARCD3SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3. (483 aa)
NR2E3Nuclear receptor subfamily 2 group E member 3. (322 aa)
ACTL6AActin like 6A; Belongs to the actin family. (429 aa)
PDE6BPhosphodiesterase. (853 aa)
PFDN5Prefoldin subunit 5. (154 aa)
BBS4Bardet-Biedl syndrome 4. (519 aa)
MERTKMER proto-oncogene, tyrosine kinase. (999 aa)
BARHL2BarH like homeobox 2. (383 aa)
TGIF2TGFB induced factor homeobox 2. (240 aa)
PTF1APancreas associated transcription factor 1a. (326 aa)
RPGRIP1RPGR interacting protein 1. (1243 aa)
DLL1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (722 aa)
LPCAT1Lysophosphatidylcholine acyltransferase 1. (533 aa)
ACVRL1Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (513 aa)
A0A4W2CYM1Uncharacterized protein. (1207 aa)
RORBRAR related orphan receptor B. (470 aa)
TBC1D32TBC1 domain family member 32. (1313 aa)
CRB2Crumbs cell polarity complex component 2. (1281 aa)
BHLHE23Basic helix-loop-helix family member e23. (222 aa)
IHHHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (412 aa)
VSX1Visual system homeobox 1. (365 aa)
SLC4A5Anion exchange protein. (1142 aa)
VAX2Ventral anterior homeobox 2. (285 aa)
TUBTubby-like protein; Belongs to the TUB family. (563 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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