STRINGSTRING
NF2 NF2 SOX9 SOX9 NTRK2 NTRK2 TTC8 TTC8 HCN1 HCN1 PROM1 PROM1 NRL NRL GNAT2 GNAT2 SDK2 SDK2 RP1 RP1 STAT3 STAT3 NOTCH1 NOTCH1 SOX8 SOX8 ROM1 ROM1 USH1C USH1C IHH IHH NAGLU NAGLU RPGRIP1L RPGRIP1L PDE6C PDE6C THRB THRB BBS4 BBS4 RPGRIP1 RPGRIP1 RORB RORB CRB2 CRB2 THY1 THY1 CABP4 CABP4 BHLHE23 BHLHE23
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NF2Neurofibromin 2. (596 aa)
SOX9SRY-box transcription factor 9. (524 aa)
NTRK2Tyrosine-protein kinase receptor. (837 aa)
TTC8Tetratricopeptide repeat domain 8. (501 aa)
HCN1Hyperpolarization activated cyclic nucleotide gated potassium channel 1. (877 aa)
PROM1Prominin 1. (853 aa)
NRLNeural retina leucine zipper. (236 aa)
GNAT2G protein subunit alpha transducin 2. (354 aa)
SDK2Sidekick cell adhesion molecule 2. (2172 aa)
RP1RP1 axonemal microtubule associated. (2105 aa)
STAT3Signal transducer and activator of transcription. (770 aa)
NOTCH1Notch receptor 1. (2533 aa)
SOX8SRY-box transcription factor 8. (534 aa)
ROM1Retinal outer segment membrane protein 1. (351 aa)
USH1CUSH1 protein network component harmonin. (859 aa)
IHHHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (412 aa)
NAGLUN-acetyl-alpha-glucosaminidase. (741 aa)
RPGRIP1LRPGRIP1 like. (1274 aa)
PDE6CPhosphodiesterase. (855 aa)
THRBThyroid hormone receptor beta. (476 aa)
BBS4Bardet-Biedl syndrome 4. (519 aa)
RPGRIP1RPGR interacting protein 1. (1243 aa)
RORBRAR related orphan receptor B. (470 aa)
CRB2Crumbs cell polarity complex component 2. (1281 aa)
THY1Thy-1 cell surface antigen. (161 aa)
CABP4Calcium binding protein 4. (278 aa)
BHLHE23Basic helix-loop-helix family member e23. (222 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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