STRINGSTRING
CSRNP1 CSRNP1 RRAS RRAS PTPN11 PTPN11 MSX1 MSX1 PDGFRA PDGFRA STRA6 STRA6 COL1A1 COL1A1 TIPARP TIPARP DLX5 DLX5 TGFB3 TGFB3 CRISPLD2 CRISPLD2 CRISPLD1 CRISPLD1 LEF1 LEF1 ANKRD11 ANKRD11 RAB3GAP1 RAB3GAP1 LOC113892965 LOC113892965 PAX9 PAX9 TGFB1 TGFB1 SGPL1 SGPL1 NIPBL NIPBL MMP2 MMP2 SCX SCX PLEKHA1 PLEKHA1 ARID5B ARID5B EP300 EP300 NOG NOG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CSRNP1Cysteine and serine rich nuclear protein 1. (605 aa)
RRASRAS related. (218 aa)
PTPN11Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (593 aa)
MSX1Msh homeobox 1. (366 aa)
PDGFRAPlatelet-derived growth factor receptor alpha; Tyrosine-protein kinase that acts as a cell-surface receptor for PDGFA, PDGFB and PDGFC and plays an essential role in the regulation of embryonic development, cell proliferation, survival and chemotaxis. Depending on the context, promotes or inhibits cell proliferation and cell migration. Plays an important role in the differentiation of bone marrow-derived mesenchymal stem cells. Required for normal skeleton development. (1098 aa)
STRA6Stimulated by retinoic acid 6. (668 aa)
COL1A1Collagen type I alpha 1 chain. (1584 aa)
TIPARPTCDD inducible poly(ADP-ribose) polymerase. (656 aa)
DLX5Distal-less homeobox 5. (289 aa)
TGFB3Transforming growth factor beta; Belongs to the TGF-beta family. (452 aa)
CRISPLD2Cysteine rich secretory protein LCCL domain containing 2. (497 aa)
CRISPLD1Cysteine rich secretory protein LCCL domain containing 1. (536 aa)
LEF1Lymphoid enhancer binding factor 1. (430 aa)
ANKRD11Ankyrin repeat domain 11. (2575 aa)
RAB3GAP1RAB3 GTPase activating protein catalytic subunit 1. (991 aa)
LOC113892965SCHIP-1 domain-containing protein. (554 aa)
PAX9Paired box 9. (367 aa)
TGFB1Transforming growth factor beta 1. (443 aa)
SGPL1Sphingosine-1-phosphate lyase 1. (568 aa)
NIPBLNipped-B protein. (2698 aa)
MMP2Matrix metallopeptidase 2. (661 aa)
SCXScleraxis bHLH transcription factor. (202 aa)
PLEKHA1Pleckstrin homology domain containing A1. (404 aa)
ARID5BAT-rich interaction domain 5B. (1181 aa)
EP300E1A binding protein p300. (2411 aa)
NOGNoggin; Inhibitor of bone morphogenetic proteins (BMP) signaling which is required for growth and patterning of the neural tube and somite. (232 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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