22 items (Bos indicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A4W2EIA3	FGGY_N domain-containing protein. (541 aa)
	MCM2	DNA helicase; Belongs to the MCM family. (902 aa)
	CORO1A	Coronin; Belongs to the WD repeat coronin family. (461 aa)
	RPLP0	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (318 aa)
	A0A4W2C839	BZIP domain-containing protein. (376 aa)
	MRC1	Mannose receptor C-type 1. (1455 aa)
	RUFY4	RUN and FYVE domain containing 4. (571 aa)
	DCSTAMP	Dendrocyte expressed seven transmembrane protein. (510 aa)
	GATA3	GATA binding protein 3. (467 aa)
	STAT6	Signal transducer and activator of transcription. (847 aa)
	LEF1	Lymphoid enhancer binding factor 1. (430 aa)
	KEAP1	Kelch like ECH associated protein 1. (623 aa)
	PML	Promyelocytic leukemia. (871 aa)
	FASN	Fatty acid synthase. (2515 aa)
	HSPA5	Heat shock protein family A (Hsp70) member 5; Belongs to the heat shock protein 70 family. (655 aa)
	JAK3	Tyrosine-protein kinase. (1181 aa)
	TCF7	Transcription factor 7. (473 aa)
	ALAD	Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. (329 aa)
	LINC01862	Long intergenic non-protein coding RNA 1862. (291 aa)
	IMPDH2	Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Could also have a single-stranded nucleic acid-binding activity and could play a role in RNA and/or DNA metabolism. It may also have a role in the development of malignancy and the growth progression of some tumors. (514 aa)
	CLEC17A	C-type lectin domain-containing protein. (241 aa)
	NFIL3	Nuclear factor, interleukin 3 regulated. (468 aa)

Your Current Organism:

Bos indicus

NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A4W2C839	HSPA5	A0A4W2C839	A0A4W2EIV7	BZIP domain-containing protein.	Heat shock protein family A (Hsp70) member 5; Belongs to the heat shock protein 70 family.	0.792
A0A4W2C839	LINC01862	A0A4W2C839	A0A4W2FH18	BZIP domain-containing protein.	Long intergenic non-protein coding RNA 1862.	0.404
A0A4W2C839	NFIL3	A0A4W2C839	A0A4W2HTH8	BZIP domain-containing protein.	Nuclear factor, interleukin 3 regulated.	0.404
A0A4W2C839	RPLP0	A0A4W2C839	A0A4W2C6X9	BZIP domain-containing protein.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.577
ALAD	FASN	A0A4W2FH17	A0A4W2EHY5	Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.	Fatty acid synthase.	0.822
FASN	ALAD	A0A4W2EHY5	A0A4W2FH17	Fatty acid synthase.	Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.	0.822
GATA3	LEF1	A0A4W2CXE1	A0A4W2E1D4	GATA binding protein 3.	Lymphoid enhancer binding factor 1.	0.480
GATA3	LINC01862	A0A4W2CXE1	A0A4W2FH18	GATA binding protein 3.	Long intergenic non-protein coding RNA 1862.	0.406
GATA3	NFIL3	A0A4W2CXE1	A0A4W2HTH8	GATA binding protein 3.	Nuclear factor, interleukin 3 regulated.	0.406
GATA3	STAT6	A0A4W2CXE1	A0A4W2D8P3	GATA binding protein 3.	Signal transducer and activator of transcription.	0.689
GATA3	TCF7	A0A4W2CXE1	A0A4W2FFS8	GATA binding protein 3.	Transcription factor 7.	0.434
HSPA5	A0A4W2C839	A0A4W2EIV7	A0A4W2C839	Heat shock protein family A (Hsp70) member 5; Belongs to the heat shock protein 70 family.	BZIP domain-containing protein.	0.792
JAK3	STAT6	A0A4W2EXR7	A0A4W2D8P3	Tyrosine-protein kinase.	Signal transducer and activator of transcription.	0.973
LEF1	GATA3	A0A4W2E1D4	A0A4W2CXE1	Lymphoid enhancer binding factor 1.	GATA binding protein 3.	0.480
LEF1	TCF7	A0A4W2E1D4	A0A4W2FFS8	Lymphoid enhancer binding factor 1.	Transcription factor 7.	0.869
LINC01862	A0A4W2C839	A0A4W2FH18	A0A4W2C839	Long intergenic non-protein coding RNA 1862.	BZIP domain-containing protein.	0.404
LINC01862	GATA3	A0A4W2FH18	A0A4W2CXE1	Long intergenic non-protein coding RNA 1862.	GATA binding protein 3.	0.406
NFIL3	A0A4W2C839	A0A4W2HTH8	A0A4W2C839	Nuclear factor, interleukin 3 regulated.	BZIP domain-containing protein.	0.404
NFIL3	GATA3	A0A4W2HTH8	A0A4W2CXE1	Nuclear factor, interleukin 3 regulated.	GATA binding protein 3.	0.406
RPLP0	A0A4W2C839	A0A4W2C6X9	A0A4W2C839	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	BZIP domain-containing protein.	0.577

page 1 of 2

Server load: low (14%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About