STRINGSTRING
MAP3K20 MAP3K20 CCND2 CCND2 GADD45A GADD45A ITGB6 ITGB6 TANK TANK FIGNL1 FIGNL1 GADD45G GADD45G A0A4W2EMF1 A0A4W2EMF1 RAD9B RAD9B HUS1 HUS1 CDKN1A CDKN1A BRCA1 BRCA1 CHEK2 CHEK2 RAD51AP1 RAD51AP1 XRCC6 XRCC6 BLM BLM ZMPSTE24 ZMPSTE24 EGR1 EGR1 ATR ATR SIRT1 SIRT1 CRYAB CRYAB ATM ATM BBC3 BBC3 KDM1A KDM1A HSF1 HSF1 SFRP2 SFRP2 WRN WRN BRCA2 BRCA2 NET1 NET1 SFRP1 SFRP1 TMEM109 TMEM109 INTS7 INTS7 FBXO4 FBXO4 NIPBL NIPBL RAD1 RAD1 A0A4W2CIJ2 A0A4W2CIJ2 TGFB1 TGFB1 SPIDR SPIDR GRB2 GRB2 CLOCK CLOCK ECT2 ECT2 EEF1D EEF1D XRCC5 XRCC5 TNKS1BP1 TNKS1BP1 A0A4W2CRB3 A0A4W2CRB3 INO80 INO80 RAD51 RAD51 RAD9A RAD9A YAP1 YAP1 A0A4W2C3D5 A0A4W2C3D5 RHNO1 RHNO1 TLK2 TLK2 TP53 TP53 HRAS HRAS BABAM2 BABAM2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MAP3K20Mitogen-activated protein kinase kinase kinase 20. (800 aa)
CCND2Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (289 aa)
GADD45AGrowth arrest and DNA damage inducible alpha. (165 aa)
ITGB6Integrin beta; Belongs to the integrin beta chain family. (788 aa)
TANKTRAF family member associated NFKB activator. (481 aa)
FIGNL1Fidgetin like 1; Belongs to the AAA ATPase family. (677 aa)
GADD45GGrowth arrest and DNA damage inducible gamma. (158 aa)
A0A4W2EMF1Uncharacterized protein. (286 aa)
RAD9BCell cycle checkpoint control protein; Belongs to the rad9 family. (417 aa)
HUS1Checkpoint protein; Belongs to the HUS1 family. (280 aa)
CDKN1ACyclin dependent kinase inhibitor 1A. (161 aa)
BRCA1BRCA1 DNA repair associated. (1941 aa)
CHEK2Checkpoint kinase 2. (534 aa)
RAD51AP1RAD51 associated protein 1. (366 aa)
XRCC6X-ray repair cross complementing 6. (657 aa)
BLMBLM RecQ like helicase. (1430 aa)
ZMPSTE24CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (475 aa)
EGR1Early growth response protein; Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-GCG(T/G)GGGCG-3'(EGR-site) in the promoter region of target genes. Binds double-stranded target DNA, irrespective of the cytosine methylation status. Regulates the transcription of numerous target genes, and thereby plays an important role in regulating the response to growth factors, DNA damage, and ischemia. Plays a role in the regulation of cell survival, proliferation and cell death. Belongs to the EGR C2H2-type zinc-finger protein family. (542 aa)
ATRATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2644 aa)
SIRT1Sirtuin 1. (734 aa)
CRYABCrystallin alpha B; May contribute to the transparency and refractive index of the lens. Has chaperone-like activity, preventing aggregation of various proteins under a wide range of stress conditions. (223 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3054 aa)
BBC3Uncharacterized protein. (193 aa)
KDM1ALysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (877 aa)
HSF1Heat shock transcription factor 1. (553 aa)
SFRP2Secreted frizzled related protein 2. (294 aa)
WRNWRN RecQ like helicase. (1409 aa)
BRCA2BRCA2 DNA repair associated. (3420 aa)
NET1Neuroepithelial cell transforming 1. (590 aa)
SFRP1Secreted frizzled related protein 1. (307 aa)
TMEM109Transmembrane protein 109. (243 aa)
INTS7Integrator complex subunit 7. (962 aa)
FBXO4F-box protein 4. (387 aa)
NIPBLNipped-B protein. (2698 aa)
RAD1RAD1 checkpoint DNA exonuclease. (279 aa)
A0A4W2CIJ2Uncharacterized protein. (164 aa)
TGFB1Transforming growth factor beta 1. (443 aa)
SPIDRScaffold protein involved in DNA repair. (831 aa)
GRB2Growth factor receptor bound protein 2. (217 aa)
CLOCKClock circadian regulator. (844 aa)
ECT2Epithelial cell transforming 2. (944 aa)
EEF1DUncharacterized protein; Belongs to the EF-1-beta/EF-1-delta family. (890 aa)
XRCC5X-ray repair cross complementing 5. (813 aa)
TNKS1BP1Tankyrase 1 binding protein 1. (1774 aa)
A0A4W2CRB3BRCT domain-containing protein. (169 aa)
INO80INO80 complex ATPase subunit. (1584 aa)
RAD51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
RAD9ACell cycle checkpoint control protein; Belongs to the rad9 family. (422 aa)
YAP1Yes associated protein 1. (507 aa)
A0A4W2C3D5Uncharacterized protein. (223 aa)
RHNO1RAD9-HUS1-RAD1 interacting nuclear orphan 1. (241 aa)
TLK2Tousled like kinase 2. (796 aa)
TP53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (499 aa)
HRASHRas proto-oncogene, GTPase. (189 aa)
BABAM2BRISC and BRCA1 A complex member 2. (383 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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