STRINGSTRING
GPC6 GPC6 NLGN1 NLGN1 PTPRS PTPRS NTNG1 NTNG1 SLITRK3 SLITRK3 SPARCL1 SPARCL1 EFNA5 EFNA5 PTPRF PTPRF PTPRD PTPRD FLRT3 FLRT3 PCDH17 PCDH17 SLITRK1 SLITRK1 IL1RAP IL1RAP LRFN4 LRFN4 LRRC4C LRRC4C LRRC4B LRRC4B NTNG2 NTNG2 LRFN5 LRFN5 LRRC4 LRRC4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GPC6Glypican 6; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (555 aa)
NLGN1Neuroligin 1. (823 aa)
PTPRSProtein tyrosine phosphatase receptor type S. (1998 aa)
NTNG1Netrin G1. (582 aa)
SLITRK3SLIT and NTRK like family member 3. (980 aa)
SPARCL1SPARC like 1. (667 aa)
EFNA5Ephrin A5; Belongs to the ephrin family. (254 aa)
PTPRFProtein tyrosine phosphatase receptor type F. (2037 aa)
PTPRDProtein tyrosine phosphatase receptor type D. (1917 aa)
FLRT3Fibronectin leucine rich transmembrane protein 3. (649 aa)
PCDH17Protocadherin 17. (1189 aa)
SLITRK1SLIT and NTRK like family member 1. (696 aa)
IL1RAPInterleukin 1 receptor accessory protein. (685 aa)
LRFN4Leucine rich repeat and fibronectin type III domain containing 4. (748 aa)
LRRC4CLeucine rich repeat containing 4C. (640 aa)
LRRC4BLeucine rich repeat containing 4B. (715 aa)
NTNG2Netrin G2. (611 aa)
LRFN5Leucine rich repeat and fibronectin type III domain containing 5. (717 aa)
LRRC4Leucine rich repeat containing 4. (652 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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