64 items (Bos indicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ATXN7	SCA7 domain-containing protein. (886 aa)
	A0A4W2BNB0	Uncharacterized protein. (146 aa)
	MID1IP1	MID1 interacting protein 1. (182 aa)
	VILL	Villin like. (856 aa)
	SPTBN2	Spectrin beta chain; Belongs to the spectrin family. (2531 aa)
	DEF6	DEF6 guanine nucleotide exchange factor. (701 aa)
	LOC113884473	CH_2 domain-containing protein. (271 aa)
	GAS2L2	Growth arrest specific 2 like 2. (875 aa)
	KATNB1	Katanin p80 WD40 repeat-containing subunit B1; Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Microtubule release from the mitotic spindle poles may allow depolymerization of the microtubule end proximal to the spindle pole, leading to poleward microtubule flux and poleward motion of chromosome. Micr [...] (689 aa)
	APC	APC regulator of WNT signaling pathway. (2912 aa)
	CAMSAP1	Calmodulin regulated spectrin associated protein 1. (1562 aa)
	BMERB1	BMERB domain containing 1. (232 aa)
	CAPG	Capping actin protein, gelsolin like. (412 aa)
	SPTBN4	Spectrin beta, non-erythrocytic 4. (2615 aa)
	SPTBN1	Spectrin beta chain; Belongs to the spectrin family. (2350 aa)
	TMOD2	Tropomodulin 2. (351 aa)
	ATXN7L2	Ataxin 7 like 2. (784 aa)
	EPS8	Epidermal growth factor receptor pathway substrate 8. (836 aa)
	SCIN	Scinderin. (832 aa)
	APC2	APC regulator of WNT signaling pathway 2. (2264 aa)
	CAMSAP3	CKK domain-containing protein. (171 aa)
	LIMA1	LIM domain and actin binding 1. (761 aa)
	FLII	FLII actin remodeling protein. (1268 aa)
	CAPZA2	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (286 aa)
	AVIL	Advillin. (816 aa)
	TMOD3	Tropomodulin 3. (352 aa)
	ADD2	Adducin 2. (724 aa)
	CAMSAP2	Calmodulin regulated spectrin associated protein family member 2. (1506 aa)
	SPTA1	Spectrin alpha, erythrocytic 1. (2419 aa)
	TM6SF1	Transmembrane 6 superfamily member 1. (370 aa)
	ARHGEF2	Rho/Rac guanine nucleotide exchange factor 2. (1223 aa)
	CKAP2	Cytoskeleton associated protein 2. (674 aa)
	SVIL	Supervillin. (2301 aa)
	SWAP70	Switching B cell complex subunit SWAP70. (585 aa)
	SPTAN1	Spectrin alpha, non-erythrocytic 1. (2498 aa)
	TTBK2	Tau tubulin kinase 2. (1243 aa)
	TWF1	Twinfilin actin binding protein 1. (368 aa)
	PLEKHH1	Pleckstrin homology, MyTH4 and FERM domain containing H1. (1359 aa)
	NAV3	Neuron navigator 3. (2385 aa)
	SPEF1	Sperm flagellar 1. (236 aa)
	DMTN	Dematin actin binding protein. (467 aa)
	SPTB	Spectrin beta chain; Belongs to the spectrin family. (2331 aa)
	CAPZB	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (306 aa)
	GSN	Gelsolin. (846 aa)
	LMOD3	Leiomodin 3. (567 aa)
	TAOK1	TAO kinase 1. (1001 aa)
	ATXN7L1	Ataxin 7 like 1. (993 aa)
	PIK3CA	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1068 aa)
	HDGFL3	HDGF like 3. (203 aa)
	STMN2	Stathmin; Belongs to the stathmin family. (179 aa)
	LMOD1	Leiomodin 1. (578 aa)
	MAP6D1	MAP6 domain containing 1. (192 aa)
	RDX	Radixin. (624 aa)
	LMOD2	Leiomodin 2. (585 aa)
	CAPZA3	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (299 aa)
	TMOD1	Tropomodulin 1. (359 aa)
	ADD1	Adducin 1. (769 aa)
	TWF2	Twinfilin actin binding protein 2. (349 aa)
	CAPZA1	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (286 aa)
	ADD3	Adducin 3. (706 aa)
	CIB1	Calcium and integrin binding 1. (191 aa)
	PLEKHH2	Pleckstrin homology, MyTH4 and FERM domain containing H2. (1491 aa)
	VIL1	Villin 1. (827 aa)
	TMOD4	Tropomodulin 4. (379 aa)

Your Current Organism:

Bos indicus

NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADD1	ADD2	A0A4W2HFD7	A0A4W2E7U5	Adducin 1.	Adducin 2.	0.980
ADD1	ADD3	A0A4W2HFD7	A0A4W2HWH8	Adducin 1.	Adducin 3.	0.961
ADD1	CAPZA2	A0A4W2HFD7	A0A4W2EDI5	Adducin 1.	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.426
ADD1	CAPZB	A0A4W2HFD7	A0A4W2DGI5	Adducin 1.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.629
ADD1	DMTN	A0A4W2HFD7	A0A4W2D8V8	Adducin 1.	Dematin actin binding protein.	0.709
ADD1	TMOD1	A0A4W2HFD7	A0A4W2HBG6	Adducin 1.	Tropomodulin 1.	0.778
ADD1	TMOD2	A0A4W2HFD7	A0A4W2G2L0	Adducin 1.	Tropomodulin 2.	0.520
ADD1	TMOD3	A0A4W2HFD7	A0A4W2EB54	Adducin 1.	Tropomodulin 3.	0.573
ADD1	TMOD4	A0A4W2HFD7	A0A4W2IFP1	Adducin 1.	Tropomodulin 4.	0.699
ADD2	ADD1	A0A4W2E7U5	A0A4W2HFD7	Adducin 2.	Adducin 1.	0.980
ADD2	CAPZB	A0A4W2E7U5	A0A4W2DGI5	Adducin 2.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.602
ADD2	DMTN	A0A4W2E7U5	A0A4W2D8V8	Adducin 2.	Dematin actin binding protein.	0.820
ADD2	RDX	A0A4W2E7U5	A0A4W2GFC5	Adducin 2.	Radixin.	0.424
ADD2	SPTB	A0A4W2E7U5	A0A4W2D9G0	Adducin 2.	Spectrin beta chain; Belongs to the spectrin family.	0.454
ADD2	TMOD1	A0A4W2E7U5	A0A4W2HBG6	Adducin 2.	Tropomodulin 1.	0.710
ADD2	TMOD2	A0A4W2E7U5	A0A4W2G2L0	Adducin 2.	Tropomodulin 2.	0.694
ADD2	TMOD3	A0A4W2E7U5	A0A4W2EB54	Adducin 2.	Tropomodulin 3.	0.693
ADD2	TMOD4	A0A4W2E7U5	A0A4W2IFP1	Adducin 2.	Tropomodulin 4.	0.701
ADD3	ADD1	A0A4W2HWH8	A0A4W2HFD7	Adducin 3.	Adducin 1.	0.961
ADD3	CAPZB	A0A4W2HWH8	A0A4W2DGI5	Adducin 3.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.404

page 1 of 10

Server load: low (18%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About