STRINGSTRING
RIPOR2 RIPOR2 UNC5A UNC5A TRPV3 TRPV3 TRPV1 TRPV1 MYO1H MYO1H MYO1C MYO1C STX4 STX4 A0A4W2D0D8 A0A4W2D0D8 SGCE SGCE MYO1D MYO1D SHISA8 SHISA8 A0A4W2DVQ4 A0A4W2DVQ4 SHISA9 SHISA9 GPER1 GPER1 SHISA6 SHISA6 A0A4W2EE95 A0A4W2EE95 LAMP5 LAMP5 A0A4W2ERB4 A0A4W2ERB4 NFASC NFASC ATP6AP2 ATP6AP2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RIPOR2PL48 domain-containing protein. (1065 aa)
UNC5AUnc-5 netrin receptor A. (902 aa)
TRPV3Transient receptor potential cation channel subfamily V member 3; Belongs to the transient receptor (TC 1.A.4) family. (798 aa)
TRPV1Transient receptor potential cation channel subfamily V member 1; Belongs to the transient receptor (TC 1.A.4) family. (837 aa)
MYO1HMyosin IH; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1038 aa)
MYO1CMyosin IC; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1098 aa)
STX4Syntaxin 4; Belongs to the syntaxin family. (447 aa)
A0A4W2D0D8XRCC1_N domain-containing protein. (405 aa)
SGCESarcoglycan epsilon. (496 aa)
MYO1DMyosin ID; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1006 aa)
SHISA8Shisa family member 8. (401 aa)
A0A4W2DVQ4Death domain-containing protein. (237 aa)
SHISA9Shisa family member 9. (425 aa)
GPER1G protein-coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family. (354 aa)
SHISA6Shisa family member 6. (552 aa)
A0A4W2EE95Ion_trans domain-containing protein. (432 aa)
LAMP5Lysosomal associated membrane protein family member 5. (321 aa)
A0A4W2ERB4Uncharacterized protein. (242 aa)
NFASCNeurofascin. (1236 aa)
ATP6AP2Uncharacterized protein. (377 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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