(31 nodes) Polysomal ribosome network (Bos indicus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPS29	Uncharacterized protein. (98 aa)
	A0A4W2DDC5	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (99 aa)
	BTF3L4	Transcription factor BTF3; Belongs to the NAC-beta family. (158 aa)
	RPS26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
	LOC113894965	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
	DHX9	DExH-box helicase 9. (1287 aa)
	A0A4W2E3E9	Uncharacterized protein. (144 aa)
	RPL6	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (287 aa)
	A0A4W2E9Z0	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (104 aa)
	A0A4W2EUJ2	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (85 aa)
	A0A4W2EX00	Ribosomal_L6e_N domain-containing protein. (235 aa)
	RPS23	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (145 aa)
	RPL7A	Ribosomal_L7Ae domain-containing protein. (266 aa)
	RPL24	Ribosomal protein L24. (157 aa)
	RPL30	Ribosomal protein L30. (115 aa)
	RPL19	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (194 aa)
	ABCF1	ATP binding cassette subfamily F member 1. (845 aa)
	A0A4W2DBG5	Ribosomal_L7Ae domain-containing protein. (123 aa)
	A0A4W2E2X2	Ribosomal_L7Ae domain-containing protein. (213 aa)
	LARP4B	HTH La-type RNA-binding domain-containing protein. (1658 aa)
	RPS28	Ribosomal protein S28. (69 aa)
	A0A4W2D1R1	Uncharacterized protein. (56 aa)
	A0A4W2CXJ3	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (346 aa)
	A0A4W2CN65	Transcription factor BTF3; Belongs to the NAC-beta family. (150 aa)
	LOC113879889	Ribosomal_L7Ae domain-containing protein. (115 aa)
	A0A4W2C4F6	Uncharacterized protein. (101 aa)
	A0A4W2BY99	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (222 aa)
	LOC113905115	Ribosomal_L7Ae domain-containing protein. (115 aa)
	A0A4W2BTU3	Uncharacterized protein. (135 aa)
	NUFIP2	Nuclear FMR1 interacting protein 2. (697 aa)
	A0A4W2GXE6	Uncharacterized protein. (124 aa)

Your Current Organism:

Bos indicus

NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A4W2BTU3	A0A4W2BY99	A0A4W2BTU3	A0A4W2BY99	Uncharacterized protein.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.792
A0A4W2BTU3	A0A4W2CXJ3	A0A4W2BTU3	A0A4W2CXJ3	Uncharacterized protein.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.792
A0A4W2BTU3	A0A4W2D1R1	A0A4W2BTU3	A0A4W2D1R1	Uncharacterized protein.	Uncharacterized protein.	0.975
A0A4W2BTU3	A0A4W2DBG5	A0A4W2BTU3	A0A4W2DBG5	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.892
A0A4W2BTU3	A0A4W2DDC5	A0A4W2BTU3	A0A4W2DDC5	Uncharacterized protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.870
A0A4W2BTU3	A0A4W2E2X2	A0A4W2BTU3	A0A4W2E2X2	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.951
A0A4W2BTU3	A0A4W2E9Z0	A0A4W2BTU3	A0A4W2E9Z0	Uncharacterized protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.870
A0A4W2BTU3	A0A4W2EX00	A0A4W2BTU3	A0A4W2EX00	Uncharacterized protein.	Ribosomal_L6e_N domain-containing protein.	0.792
A0A4W2BTU3	ABCF1	A0A4W2BTU3	A0A4W2E296	Uncharacterized protein.	ATP binding cassette subfamily F member 1.	0.515
A0A4W2BTU3	LOC113879889	A0A4W2BTU3	A0A4W2C6J5	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.911
A0A4W2BTU3	LOC113894965	A0A4W2BTU3	A0A4W2H6C0	Uncharacterized protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.870
A0A4W2BTU3	LOC113905115	A0A4W2BTU3	A0A4W2BWC0	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.911
A0A4W2BTU3	RPL19	A0A4W2BTU3	A0A4W2E0U9	Uncharacterized protein.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.979
A0A4W2BTU3	RPL24	A0A4W2BTU3	A0A4W2G516	Uncharacterized protein.	Ribosomal protein L24.	0.981
A0A4W2BTU3	RPL30	A0A4W2BTU3	A0A4W2HM10	Uncharacterized protein.	Ribosomal protein L30.	0.911
A0A4W2BTU3	RPL6	A0A4W2BTU3	A0A4W2E7H4	Uncharacterized protein.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.792
A0A4W2BTU3	RPL7A	A0A4W2BTU3	A0A4W2F6L8	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.951
A0A4W2BTU3	RPS26	A0A4W2BTU3	A0A4W2DJ47	Uncharacterized protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.896
A0A4W2BTU3	RPS28	A0A4W2BTU3	A0A4W2D399	Uncharacterized protein.	Ribosomal protein S28.	0.978
A0A4W2BTU3	RPS29	A0A4W2BTU3	A0A4W2GUA8	Uncharacterized protein.	Uncharacterized protein.	0.975

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