STRINGSTRING
HNRNPM HNRNPM CCDC12 CCDC12 CWF19L2 CWF19L2 CWF19L1 CWF19L1 TFIP11 TFIP11 A0A4W2CQ28 A0A4W2CQ28 MYEF2 MYEF2 XAB2 XAB2 CRNKL1 CRNKL1 CCDC130 CCDC130 SYF2 SYF2 GCFC2 GCFC2 ISY1 ISY1 DHX15 DHX15
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HNRNPMHeterogeneous nuclear ribonucleoprotein M. (730 aa)
CCDC12Coiled-coil domain containing 12. (168 aa)
CWF19L2CWF19 like cell cycle control factor 2. (850 aa)
CWF19L1CWF19 like cell cycle control factor 1. (642 aa)
TFIP11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Intron turnover seems to proceed through reactions in two lariat-intron associated complexes termed Intron Large (IL) and Intron Small (IS). In cooperation with DHX15 seems to mediate the transition of the U2, U5 and U6 snRNP- containing IL complex to the snRNP-free IS complex leading to efficient debranching and turnover of excised introns. May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extrac [...] (837 aa)
A0A4W2CQ28RRM domain-containing protein. (212 aa)
MYEF2Myelin expression factor 2. (576 aa)
XAB2XPA binding protein 2. (855 aa)
CRNKL1Crooked neck pre-mRNA splicing factor 1. (693 aa)
CCDC130Coiled-coil domain containing 130. (400 aa)
SYF2SYF2 pre-mRNA splicing factor. (245 aa)
GCFC2GC-rich sequence DNA-binding factor 2. (782 aa)
ISY1Uncharacterized protein. (284 aa)
DHX15DEAH-box helicase 15. (795 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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