STRINGSTRING
RNPS1 RNPS1 CASC3 CASC3 NUP50 NUP50 A0A4W2BY32 A0A4W2BY32 SEH1L SEH1L A0A4W2BQQ8 A0A4W2BQQ8 THOC7 THOC7 THOC6 THOC6 NUP58 NUP58 MAGOHB MAGOHB CHTOP CHTOP MAGOH MAGOH NUP37 NUP37 SLU7 SLU7 SARNP SARNP NUP155 NUP155 U2AF1L4 U2AF1L4 NXT1 NXT1 THOC1 THOC1 LOC113888099 LOC113888099 DDX39A DDX39A NUP43 NUP43 SRSF1 SRSF1 SRSF9 SRSF9 POLDIP3 POLDIP3 NCBP2 NCBP2 NUP35 NUP35 SRSF2 SRSF2 POM121C POM121C DHX38 DHX38 NUP205 NUP205 GLE1 GLE1 ZC3H11A ZC3H11A A0A4W2CSP1 A0A4W2CSP1 NUP188 NUP188 NUP160 NUP160 U2AF2 U2AF2 RANBP2 RANBP2 A0A4W2CG13 A0A4W2CG13 DDX39B DDX39B ALYREF ALYREF SEC13 SEC13 NXF1 NXF1 SREK1 SREK1 THOC5 THOC5 NUP85 NUP85 THOC3 THOC3 NUP214 NUP214 C12orf50 C12orf50 A0A4W2D9G8 A0A4W2D9G8 A0A4W2DAH5 A0A4W2DAH5 NUP42 NUP42 RAE1 RAE1 NDC1 NDC1 THOC2 THOC2 SRSF11 SRSF11 NUP210L NUP210L A0A4W2DHS8 A0A4W2DHS8 NUP210 NUP210 A0A4W2DTT0 A0A4W2DTT0 EIF4A3 EIF4A3 TPR TPR NUP93 NUP93 A0A4W2E078 A0A4W2E078 SRSF3 SRSF3 NUP88 NUP88 NUP133 NUP133 U2AF1 U2AF1 CDC40 CDC40 SRSF7 SRSF7 NUP98 NUP98 NCBP1 NCBP1 NUP107 NUP107 AAAS AAAS FYTTD1 FYTTD1 SRSF5 SRSF5 SRRM1 SRRM1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RNPS1RRM domain-containing protein. (305 aa)
CASC3CASC3 exon junction complex subunit. (720 aa)
NUP50Nucleoporin 50. (465 aa)
A0A4W2BY32Uncharacterized protein. (216 aa)
SEH1LSEH1 like nucleoporin; Belongs to the WD repeat SEC13 family. (360 aa)
A0A4W2BQQ8NTF2 domain-containing protein. (554 aa)
THOC7THO complex 7. (204 aa)
THOC6THO complex 6. (377 aa)
NUP58Nucleoporin 58. (586 aa)
MAGOHBMago homolog B, exon junction complex subunit. (148 aa)
CHTOPChromatin target of PRMT1. (277 aa)
MAGOHMago homolog, exon junction complex subunit. (146 aa)
NUP37Nucleoporin 37. (326 aa)
SLU7SLU7 homolog, splicing factor. (586 aa)
SARNPSAP domain containing ribonucleoprotein. (210 aa)
NUP155Nucleoporin 155. (1449 aa)
U2AF1L4Uncharacterized protein. (228 aa)
NXT1Nuclear transport factor 2 like export factor 1. (140 aa)
THOC1THO complex 1. (657 aa)
LOC113888099NTF2 domain-containing protein. (531 aa)
DDX39ADExD-box helicase 39A. (427 aa)
NUP43Nucleoporin 43. (380 aa)
SRSF1Uncharacterized protein. (248 aa)
SRSF9Uncharacterized protein. (221 aa)
POLDIP3DNA polymerase delta interacting protein 3. (392 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
NUP35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (327 aa)
SRSF2RRM domain-containing protein. (221 aa)
POM121CUncharacterized protein. (1216 aa)
DHX38DEAH-box helicase 38. (1227 aa)
NUP205Nucleoporin 205. (2024 aa)
GLE1GLE1 RNA export mediator. (698 aa)
ZC3H11AUncharacterized protein. (816 aa)
A0A4W2CSP1Uncharacterized protein. (319 aa)
NUP188Nucleoporin 188. (2017 aa)
NUP160Nucleoporin 160. (1402 aa)
U2AF2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (494 aa)
RANBP2RAN binding protein 2. (3143 aa)
A0A4W2CG13Uncharacterized protein. (75 aa)
DDX39BDExD-box helicase 39B. (428 aa)
ALYREFAly/REF export factor. (263 aa)
SEC13SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (325 aa)
NXF1Nuclear RNA export factor 1. (620 aa)
SREK1Splicing regulatory glutamic acid and lysine rich protein 1. (628 aa)
THOC5THO complex 5. (732 aa)
NUP85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (656 aa)
THOC3THO complex 3. (351 aa)
NUP214Nucleoporin 214. (2141 aa)
C12orf50Chromosome 12 open reading frame 50. (415 aa)
A0A4W2D9G8Uncharacterized protein. (221 aa)
A0A4W2DAH5RRM domain-containing protein. (129 aa)
NUP42Nucleoporin 42. (420 aa)
RAE1Ribonucleic acid export 1. (367 aa)
NDC1NDC1 transmembrane nucleoporin. (784 aa)
THOC2THO complex 2. (1584 aa)
SRSF11Serine and arginine rich splicing factor 11. (482 aa)
NUP210LNucleoporin 210 like. (1883 aa)
A0A4W2DHS8RRM domain-containing protein. (294 aa)
NUP210Nucleoporin 210. (1889 aa)
A0A4W2DTT0NTF2 domain-containing protein. (539 aa)
EIF4A3Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (411 aa)
TPRTranslocated promoter region, nuclear basket protein. (2444 aa)
NUP93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (819 aa)
A0A4W2E078RRM domain-containing protein. (154 aa)
SRSF3Serine and arginine rich splicing factor 3. (125 aa)
NUP88Nucleoporin 88. (741 aa)
NUP133Nucleoporin 133. (1156 aa)
U2AF1Uncharacterized protein. (237 aa)
CDC40Cell division cycle 40. (611 aa)
SRSF7Serine and arginine rich splicing factor 7. (235 aa)
NUP98Nucleoporin 98. (1816 aa)
NCBP1Nuclear cap binding protein subunit 1. (790 aa)
NUP107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (960 aa)
AAASAladin WD repeat nucleoporin. (547 aa)
FYTTD1Forty-two-three domain containing 1. (318 aa)
SRSF5Serine and arginine rich splicing factor 5. (272 aa)
SRRM1Serine and arginine repetitive matrix 1. (915 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.