STRINGSTRING
APOC3 APOC3 SDR9C7 SDR9C7 LOC113903405 LOC113903405 GUCY2D GUCY2D GPC5 GPC5 A0A4W2EIV4 A0A4W2EIV4 NMT2 NMT2 AGRN AGRN A0A4W2EKX7 A0A4W2EKX7 LRP12 LRP12 PLB1 PLB1 VEZT VEZT PLEKHD1 PLEKHD1 RDH12 RDH12 A0A4W2ESW2 A0A4W2ESW2 GPC1 GPC1 PDE6A PDE6A A0A4W2F1F9 A0A4W2F1F9 A0A4W2F1G4 A0A4W2F1G4 MYO7B MYO7B A0A4W2F478 A0A4W2F478 RDH5 RDH5 STRA6 STRA6 PDE6H PDE6H GRK4 GRK4 HSD17B6 HSD17B6 APOC2 APOC2 GRK1 GRK1 RHO RHO NMT1 NMT1 LOC113891189 LOC113891189 LRAT LRAT GUCA1A GUCA1A BCO1 BCO1 FNTB FNTB GPC2 GPC2 CYP4V2 CYP4V2 APOA2 APOA2 RPE65 RPE65 CNGB3 CNGB3 LRP3 LRP3 A0A4W2ING3 A0A4W2ING3 RBP3 RBP3 DHRS12 DHRS12 TTR TTR PTCHD1 PTCHD1 LOC113884940 LOC113884940 PNLIP PNLIP BCO2 BCO2 GNAT1 GNAT1 CLPS CLPS GUCA1B GUCA1B PYROXD2 PYROXD2 PDE6C PDE6C LOC113906256 LOC113906256 PDE6G PDE6G RLBP1 RLBP1 A0A4W2EBF7 A0A4W2EBF7 OPN1SW OPN1SW PTCHD4 PTCHD4 RGS9 RGS9 APOB APOB GPIHBP1 GPIHBP1 RDH10 RDH10 GNB1 GNB1 A0A4W2E716 A0A4W2E716 CAMKMT CAMKMT RBP4 RBP4 LRP8 LRP8 RCVRN RCVRN APOA1 APOA1 APOM APOM LRP2 LRP2 NAPEPLD NAPEPLD DEPDC1 DEPDC1 LRP1B LRP1B RBP2 RBP2 GRK7 GRK7 RDH8 RDH8 A0A4W2DHQ7 A0A4W2DHQ7 METAP1 METAP1 SDC1 SDC1 LPL LPL PPEF2 PPEF2 HSPG2 HSPG2 CNGA1 CNGA1 SAG SAG CHURC1 CHURC1 GNGT1 GNGT1 LRP10 LRP10 METAP2 METAP2 PDE6B PDE6B CALM1 CALM1 APOE APOE A0A4W2D032 A0A4W2D032 ABCA4 ABCA4 GPC6 GPC6 A0A4W2CZ11 A0A4W2CZ11 RGS9BP RGS9BP DHRS3 DHRS3 GNB5 GNB5 CNGB1 CNGB1 SDC3 SDC3 A0A4W2CST7 A0A4W2CST7 A0A4W2CST5 A0A4W2CST5 A0A4W2CQT0 A0A4W2CQT0 LOC113903416 LOC113903416 A0A4W2CQH2 A0A4W2CQH2 SDC4 SDC4 SDC2 SDC2 LRP1 LRP1 A0A4W2CPF8 A0A4W2CPF8 LOC113903407 LOC113903407 A0A4W2E9C4 A0A4W2E9C4 A0A4W2CM65 A0A4W2CM65 A0A4W2CM56 A0A4W2CM56 SMPDL3A SMPDL3A MYO7A MYO7A APOA4 APOA4 A0A4W2CCN9 A0A4W2CCN9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APOC3Apolipoprotein C3. (99 aa)
SDR9C7Short chain dehydrogenase/reductase family 9C member 7; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (313 aa)
LOC113903405Aldo_ket_red domain-containing protein. (323 aa)
GUCY2DGuanylate cyclase. (1108 aa)
GPC5Glypican 5; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (571 aa)
A0A4W2EIV4EF-hand domain-containing protein; Belongs to the calmodulin family. (87 aa)
NMT2Glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins; Belongs to the NMT family. (498 aa)
AGRNAgrin. (2086 aa)
A0A4W2EKX7Aldo_ket_red domain-containing protein. (290 aa)
LRP12LDL receptor related protein 12. (862 aa)
PLB1Phospholipase B1. (1459 aa)
VEZTVezatin, adherens junctions transmembrane protein. (823 aa)
PLEKHD1Pleckstrin homology and coiled-coil domain containing D1. (506 aa)
RDH12Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (308 aa)
A0A4W2ESW2Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (459 aa)
GPC1Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (610 aa)
PDE6APhosphodiesterase. (859 aa)
A0A4W2F1F9Aldo_ket_red domain-containing protein. (243 aa)
A0A4W2F1G4FABP domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (121 aa)
MYO7BMyosin VIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2140 aa)
A0A4W2F478Uncharacterized protein. (106 aa)
RDH5Retinol dehydrogenase 5; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (318 aa)
STRA6Stimulated by retinoic acid 6. (668 aa)
PDE6HPhosphodiesterase 6H. (83 aa)
GRK4G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (577 aa)
HSD17B6Hydroxysteroid 17-beta dehydrogenase 6; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (316 aa)
APOC2Uncharacterized protein. (241 aa)
GRK1G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (561 aa)
RHORhodopsin. (348 aa)
NMT1Glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins; Belongs to the NMT family. (496 aa)
LOC113891189Aldo_ket_red domain-containing protein. (316 aa)
LRATLecithin retinol acyltransferase. (230 aa)
GUCA1AUncharacterized protein. (205 aa)
BCO1Beta-carotene oxygenase 1. (547 aa)
FNTBProtein farnesyltransferase subunit beta; Essential subunit of the farnesyltransferase complex. Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins having the C-terminal sequence Cys-aliphatic-aliphatic-X. (437 aa)
GPC2Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (578 aa)
CYP4V2Cytochrome P450 family 4 subfamily V member 2; Belongs to the cytochrome P450 family. (527 aa)
APOA2Apolipoprotein A2. (100 aa)
RPE65Retinoid isomerohydrolase RPE65. (533 aa)
CNGB3Cyclic nucleotide gated channel subunit beta 3. (770 aa)
LRP3LDL receptor related protein 3. (782 aa)
A0A4W2ING3Colipase_C domain-containing protein. (64 aa)
RBP3Retinol binding protein 3. (1286 aa)
DHRS12Dehydrogenase/reductase 12. (376 aa)
TTRTR_THY domain-containing protein. (169 aa)
PTCHD1Patched domain containing 1. (888 aa)
LOC113884940Uncharacterized protein. (2120 aa)
PNLIPTriacylglycerol lipase; Belongs to the AB hydrolase superfamily. Lipase family. (465 aa)
BCO2Beta-carotene oxygenase 2. (697 aa)
GNAT1G protein subunit alpha transducin 1. (349 aa)
CLPSColipase. (111 aa)
GUCA1BGuanylate cyclase activator 1B. (204 aa)
PYROXD2Pyridine nucleotide-disulphide oxidoreductase domain 2. (581 aa)
PDE6CPhosphodiesterase. (855 aa)
LOC113906256SSD domain-containing protein. (933 aa)
PDE6GPhosphodiesterase 6G. (87 aa)
RLBP1Retinaldehyde binding protein 1. (317 aa)
A0A4W2EBF7Uncharacterized protein. (1452 aa)
OPN1SWOpsin 1, short wave sensitive. (349 aa)
PTCHD4Patched domain containing 4. (843 aa)
RGS9Regulator of G protein signaling 9. (639 aa)
APOBApolipoprotein B. (4567 aa)
GPIHBP1Uncharacterized protein. (171 aa)
RDH10Retinol dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (341 aa)
GNB1G protein subunit beta 1. (358 aa)
A0A4W2E716Uncharacterized protein. (285 aa)
CAMKMTCalmodulin-lysine N-methyltransferase. (323 aa)
RBP4Retinol binding protein 4; Belongs to the calycin superfamily. Lipocalin family. (314 aa)
LRP8LDL receptor related protein 8. (1011 aa)
RCVRNRecoverin. (202 aa)
APOA1Apolipoprotein A1. (265 aa)
APOMApolipoprotein M. (188 aa)
LRP2LDL receptor related protein 2. (4647 aa)
NAPEPLDN-acyl phosphatidylethanolamine phospholipase D. (438 aa)
DEPDC1DEP domain containing 1. (812 aa)
LRP1BLDL receptor related protein 1B. (4596 aa)
RBP2Retinol binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (197 aa)
GRK7G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (552 aa)
RDH8Retinol dehydrogenase 8; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (331 aa)
A0A4W2DHQ7Syndecan domain-containing protein. (70 aa)
METAP1Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (389 aa)
SDC1Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (322 aa)
LPLLipoprotein lipase; Key enzyme in triglyceride metabolism. Catalyzes the hydrolysis of triglycerides from circulating chylomicrons and very low density lipoproteins (VLDL), and thereby plays an important role in lipid clearance from the blood stream, lipid utilization and storage. Mediates margination of triglyceride-rich lipoprotein particles in capillaries. Recruited to its site of action on the luminal surface of vascular endothelium by binding to GPIHBP1 and cell surface heparan sulfate proteoglycans. (499 aa)
PPEF2Serine/threonine-protein phosphatase with EF-hands. (753 aa)
HSPG2Heparan sulfate proteoglycan 2. (4395 aa)
CNGA1Cyclic nucleotide gated channel subunit alpha 1. (694 aa)
SAGS-antigen visual arrestin. (406 aa)
CHURC1Churchill domain containing 1. (140 aa)
GNGT1Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (134 aa)
LRP10LDL receptor related protein 10. (712 aa)
METAP2Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. (477 aa)
PDE6BPhosphodiesterase. (853 aa)
CALM1Uncharacterized protein; Belongs to the calmodulin family. (365 aa)
APOEApolipoprotein E. (349 aa)
A0A4W2D032Aldo_ket_red domain-containing protein. (195 aa)
ABCA4ATP binding cassette subfamily A member 4. (2281 aa)
GPC6Glypican 6; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (555 aa)
A0A4W2CZ11Aldo_ket_red domain-containing protein. (316 aa)
RGS9BPRegulator of G protein signaling 9 binding protein. (237 aa)
DHRS3Dehydrogenase/reductase 3; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (322 aa)
GNB5G protein subunit beta 5. (452 aa)
CNGB1Cyclic nucleotide gated channel subunit beta 1. (937 aa)
SDC3Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (603 aa)
A0A4W2CST7Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (317 aa)
A0A4W2CST5Uncharacterized protein. (306 aa)
A0A4W2CQT0Aldo_ket_red domain-containing protein. (355 aa)
LOC113903416Aldo_ket_red domain-containing protein. (323 aa)
A0A4W2CQH2Aldo_ket_red domain-containing protein. (196 aa)
SDC4Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (218 aa)
SDC2Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (202 aa)
LRP1LDL receptor related protein 1. (4544 aa)
A0A4W2CPF8Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (309 aa)
LOC113903407Aldo_ket_red domain-containing protein. (326 aa)
A0A4W2E9C4Uncharacterized protein. (186 aa)
A0A4W2CM65Aldo_ket_red domain-containing protein. (166 aa)
A0A4W2CM56Aldo_ket_red domain-containing protein. (323 aa)
SMPDL3AAcid sphingomyelinase-like phosphodiesterase. (450 aa)
MYO7AMyosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2116 aa)
APOA4Apolipoprotein A4. (380 aa)
A0A4W2CCN9Uncharacterized protein. (207 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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