63 items (Bos indicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NCOA5	Nuclear receptor coactivator 5. (584 aa)
	NUP35	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (327 aa)
	NUP43	Nucleoporin 43. (380 aa)
	PRKCA	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (672 aa)
	NEK6	NIMA related kinase 6; Belongs to the protein kinase superfamily. (333 aa)
	CNTD2	Cyclin N-terminal domain containing 2; Belongs to the cyclin family. (332 aa)
	LEMD2	LEM domain containing 2. (495 aa)
	NUP155	Nucleoporin 155. (1449 aa)
	A0A4W2F4R9	Uncharacterized protein. (465 aa)
	NUP37	Nucleoporin 37. (326 aa)
	A0A4W2F1Y8	CYCLIN domain-containing protein; Belongs to the cyclin family. (250 aa)
	LMNA	Lamin A/C; Belongs to the intermediate filament family. (664 aa)
	LMNTD1	Lamin tail domain containing 1. (409 aa)
	LOC113896675	Uncharacterized protein. (403 aa)
	LMNB1	Lamin B1; Belongs to the intermediate filament family. (586 aa)
	LMNB2	Lamin B2; Belongs to the intermediate filament family. (628 aa)
	AAAS	Aladin WD repeat nucleoporin. (547 aa)
	VRK2	VRK serine/threonine kinase 2. (509 aa)
	NUP107	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (960 aa)
	CCNB2	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (398 aa)
	NUP98	Nucleoporin 98. (1816 aa)
	RBM39	RNA binding motif protein 39. (530 aa)
	LEMD3	LEM domain containing 3. (913 aa)
	CCNB1	Cyclin B1; Belongs to the cyclin family. (427 aa)
	NUP133	Nucleoporin 133. (1156 aa)
	NUP88	Nucleoporin 88. (741 aa)
	NUP93	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (819 aa)
	TPR	Translocated promoter region, nuclear basket protein. (2444 aa)
	LPIN2	Lipin 2. (888 aa)
	NUP210	Nucleoporin 210. (1889 aa)
	NUP210L	Nucleoporin 210 like. (1883 aa)
	NDC1	NDC1 transmembrane nucleoporin. (784 aa)
	RAE1	Ribonucleic acid export 1. (367 aa)
	NUP42	Nucleoporin 42. (420 aa)
	WDR41	WD repeat domain 41. (459 aa)
	NUP214	Nucleoporin 214. (2141 aa)
	NEK9	NIMA related kinase 9. (977 aa)
	CTDSPL2	CTD small phosphatase like 2. (466 aa)
	NUP205	Nucleoporin 205. (2024 aa)
	LPIN1	Lipin 1. (1005 aa)
	A0A4W2CSP1	Uncharacterized protein. (319 aa)
	NUP188	Nucleoporin 188. (2017 aa)
	CTDNEP1	CTD nuclear envelope phosphatase 1. (244 aa)
	VRK1	VRK serine/threonine kinase 1; Belongs to the protein kinase superfamily. (436 aa)
	NUP160	Nucleoporin 160. (1402 aa)
	RANBP2	RAN binding protein 2. (3143 aa)
	SEC13	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (325 aa)
	A0A4W2C878	Uncharacterized protein. (63 aa)
	LMNTD2	Lamin tail domain containing 2. (641 aa)
	NUP85	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (656 aa)
	NEK7	NIMA related kinase 7; Belongs to the protein kinase superfamily. (302 aa)
	NUP50	Nucleoporin 50. (465 aa)
	A0A4W2BTG3	Uncharacterized protein. (65 aa)
	SEH1L	SEH1 like nucleoporin; Belongs to the WD repeat SEC13 family. (360 aa)
	A0A4W2BSK9	Uncharacterized protein. (784 aa)
	PLK1	Serine/threonine-protein kinase PLK. (602 aa)
	NUP58	Nucleoporin 58. (586 aa)
	LPIN3	Lipin 3. (850 aa)
	CNEP1R1	CTD nuclear envelope phosphatase 1 regulatory subunit 1. (125 aa)
	POM121C	Uncharacterized protein. (1216 aa)
	PRKCB	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (673 aa)
	CDK1	Cyclin dependent kinase 1; Belongs to the protein kinase superfamily. (297 aa)
	RBM23	RNA binding motif protein 23. (463 aa)

Your Current Organism:

Bos indicus

NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A4W2BSK9	A0A4W2F1Y8	A0A4W2BSK9	A0A4W2F1Y8	Uncharacterized protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.651
A0A4W2BSK9	CCNB1	A0A4W2BSK9	A0A4W2E648	Uncharacterized protein.	Cyclin B1; Belongs to the cyclin family.	0.957
A0A4W2BSK9	CCNB2	A0A4W2BSK9	A0A4W2EGY2	Uncharacterized protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.957
A0A4W2BSK9	CDK1	A0A4W2BSK9	A0A4W2I702	Uncharacterized protein.	Cyclin dependent kinase 1; Belongs to the protein kinase superfamily.	0.983
A0A4W2BSK9	CNTD2	A0A4W2BSK9	A0A4W2FYZ2	Uncharacterized protein.	Cyclin N-terminal domain containing 2; Belongs to the cyclin family.	0.594
A0A4W2BSK9	NEK9	A0A4W2BSK9	A0A4W2D687	Uncharacterized protein.	NIMA related kinase 9.	0.418
A0A4W2BSK9	NUP43	A0A4W2BSK9	A0A4W2GIF3	Uncharacterized protein.	Nucleoporin 43.	0.403
A0A4W2BSK9	PLK1	A0A4W2BSK9	A0A4W2BRV5	Uncharacterized protein.	Serine/threonine-protein kinase PLK.	0.978
A0A4W2BSK9	RANBP2	A0A4W2BSK9	A0A4W2CGZ4	Uncharacterized protein.	RAN binding protein 2.	0.432
A0A4W2BTG3	A0A4W2F1Y8	A0A4W2BTG3	A0A4W2F1Y8	Uncharacterized protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.651
A0A4W2BTG3	CCNB1	A0A4W2BTG3	A0A4W2E648	Uncharacterized protein.	Cyclin B1; Belongs to the cyclin family.	0.848
A0A4W2BTG3	CCNB2	A0A4W2BTG3	A0A4W2EGY2	Uncharacterized protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.848
A0A4W2BTG3	CDK1	A0A4W2BTG3	A0A4W2I702	Uncharacterized protein.	Cyclin dependent kinase 1; Belongs to the protein kinase superfamily.	0.935
A0A4W2BTG3	CNTD2	A0A4W2BTG3	A0A4W2FYZ2	Uncharacterized protein.	Cyclin N-terminal domain containing 2; Belongs to the cyclin family.	0.594
A0A4W2BTG3	NEK9	A0A4W2BTG3	A0A4W2D687	Uncharacterized protein.	NIMA related kinase 9.	0.418
A0A4W2BTG3	PLK1	A0A4W2BTG3	A0A4W2BRV5	Uncharacterized protein.	Serine/threonine-protein kinase PLK.	0.921
A0A4W2BTG3	RANBP2	A0A4W2BTG3	A0A4W2CGZ4	Uncharacterized protein.	RAN binding protein 2.	0.432
A0A4W2C878	CNEP1R1	A0A4W2C878	A0A4W2HP81	Uncharacterized protein.	CTD nuclear envelope phosphatase 1 regulatory subunit 1.	0.904
A0A4W2C878	LPIN1	A0A4W2C878	A0A4W2CV08	Uncharacterized protein.	Lipin 1.	0.731
A0A4W2C878	LPIN2	A0A4W2C878	A0A4W2DQ78	Uncharacterized protein.	Lipin 2.	0.731

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