44 items (Bos indicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TOPORS	TOP1 binding arginine/serine rich protein. (1037 aa)
	NUP210	Nucleoporin 210. (1889 aa)
	UBE2I	Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	NUP93	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (819 aa)
	NUP88	Nucleoporin 88. (741 aa)
	NUP133	Nucleoporin 133. (1156 aa)
	RANBP3L	RAN binding protein 3 like. (466 aa)
	NUP98	Nucleoporin 98. (1816 aa)
	A0A4W2EEQ4	Ubiquitin-like domain-containing protein. (72 aa)
	A0A4W2EGW0	Ubiquitin-like domain-containing protein. (80 aa)
	A0A4W2EHW8	Uncharacterized protein. (64 aa)
	NUP107	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (960 aa)
	A0A4W2DES2	Uncharacterized protein. (116 aa)
	AAAS	Aladin WD repeat nucleoporin. (547 aa)
	A0A4W2EQE8	Rad60-SLD domain-containing protein. (83 aa)
	LOC113896675	Uncharacterized protein. (403 aa)
	NUP37	Nucleoporin 37. (326 aa)
	A0A4W2F4R9	Uncharacterized protein. (465 aa)
	NUP155	Nucleoporin 155. (1449 aa)
	LOC113897490	Uncharacterized protein. (730 aa)
	NUP43	Nucleoporin 43. (380 aa)
	NUP35	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (327 aa)
	POM121C	Uncharacterized protein. (1216 aa)
	SUMO1	Small ubiquitin-related modifier. (101 aa)
	A0A4W2CSP1	Uncharacterized protein. (319 aa)
	NUP205	Nucleoporin 205. (2024 aa)
	PIAS4	Protein inhibitor of activated STAT 4. (573 aa)
	A0A4W2D7B2	Uncharacterized protein. (83 aa)
	A0A4W2D833	Ubiquitin-like domain-containing protein. (61 aa)
	NUP214	Nucleoporin 214. (2141 aa)
	A0A4W2D9I6	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	NUP42	Nucleoporin 42. (420 aa)
	RAE1	Ribonucleic acid export 1. (367 aa)
	NDC1	NDC1 transmembrane nucleoporin. (784 aa)
	NUP58	Nucleoporin 58. (586 aa)
	SEH1L	SEH1 like nucleoporin; Belongs to the WD repeat SEC13 family. (360 aa)
	NUP50	Nucleoporin 50. (465 aa)
	SUMO2	Small ubiquitin-related modifier. (95 aa)
	NUP85	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (656 aa)
	SEC13	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (325 aa)
	FAM111B	Family with sequence similarity 111 member B. (735 aa)
	KCTD2	Potassium channel tetramerization domain containing 2. (264 aa)
	NUP160	Nucleoporin 160. (1402 aa)
	NUP188	Nucleoporin 188. (2017 aa)

Your Current Organism:

Bos indicus

NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A4W2CSP1	NUP42	A0A4W2CSP1	A0A4W2DCC0	Uncharacterized protein.	Nucleoporin 42.	0.402
A0A4W2D7B2	A0A4W2D9I6	A0A4W2D7B2	A0A4W2D9I6	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.764
A0A4W2D7B2	A0A4W2EHW8	A0A4W2D7B2	A0A4W2EHW8	Uncharacterized protein.	Uncharacterized protein.	0.587
A0A4W2D7B2	KCTD2	A0A4W2D7B2	A0A4W2CK89	Uncharacterized protein.	Potassium channel tetramerization domain containing 2.	0.587
A0A4W2D7B2	NUP93	A0A4W2D7B2	A0A4W2DZZ3	Uncharacterized protein.	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.	0.402
A0A4W2D7B2	PIAS4	A0A4W2D7B2	A0A4W2D5V0	Uncharacterized protein.	Protein inhibitor of activated STAT 4.	0.784
A0A4W2D7B2	SUMO2	A0A4W2D7B2	A0A4W2C4P5	Uncharacterized protein.	Small ubiquitin-related modifier.	0.685
A0A4W2D7B2	TOPORS	A0A4W2D7B2	A0A4W2ENE0	Uncharacterized protein.	TOP1 binding arginine/serine rich protein.	0.461
A0A4W2D7B2	UBE2I	A0A4W2D7B2	A0A4W2DR12	Uncharacterized protein.	Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.	0.764
A0A4W2D833	A0A4W2D9I6	A0A4W2D833	A0A4W2D9I6	Ubiquitin-like domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.743
A0A4W2D833	A0A4W2EHW8	A0A4W2D833	A0A4W2EHW8	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.587
A0A4W2D833	KCTD2	A0A4W2D833	A0A4W2CK89	Ubiquitin-like domain-containing protein.	Potassium channel tetramerization domain containing 2.	0.587
A0A4W2D833	NUP93	A0A4W2D833	A0A4W2DZZ3	Ubiquitin-like domain-containing protein.	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.	0.402
A0A4W2D833	PIAS4	A0A4W2D833	A0A4W2D5V0	Ubiquitin-like domain-containing protein.	Protein inhibitor of activated STAT 4.	0.770
A0A4W2D833	SUMO2	A0A4W2D833	A0A4W2C4P5	Ubiquitin-like domain-containing protein.	Small ubiquitin-related modifier.	0.669
A0A4W2D833	TOPORS	A0A4W2D833	A0A4W2ENE0	Ubiquitin-like domain-containing protein.	TOP1 binding arginine/serine rich protein.	0.453
A0A4W2D833	UBE2I	A0A4W2D833	A0A4W2DR12	Ubiquitin-like domain-containing protein.	Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.	0.743
A0A4W2D9I6	A0A4W2D7B2	A0A4W2D9I6	A0A4W2D7B2	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.764
A0A4W2D9I6	A0A4W2D833	A0A4W2D9I6	A0A4W2D833	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin-like domain-containing protein.	0.743
A0A4W2D9I6	A0A4W2DES2	A0A4W2D9I6	A0A4W2DES2	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.799

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