STRINGSTRING
A0A4W2DXQ9 A0A4W2DXQ9 NUP58 NUP58 SEH1L SEH1L POLR2L POLR2L NUP50 NUP50 A0A4W2BY98 A0A4W2BY98 POLR2E POLR2E A0A4W2BZU2 A0A4W2BZU2 A0A4W2C3R7 A0A4W2C3R7 AGO2 AGO2 LOC113881683 LOC113881683 LOC113881951 LOC113881951 LOC113887723 LOC113887723 LOC113881235 LOC113881235 POLR2F POLR2F NUP85 NUP85 A0A4W2C6E9 A0A4W2C6E9 POLR2A POLR2A A0A4W2C6H8 A0A4W2C6H8 A0A4W2C7C4 A0A4W2C7C4 SEC13 SEC13 A0A4W2CAS1 A0A4W2CAS1 A0A4W2CDJ5 A0A4W2CDJ5 RAN RAN A0A4W2CG17 A0A4W2CG17 A0A4W2CGH5 A0A4W2CGH5 RANBP2 RANBP2 A0A4W2CHW6 A0A4W2CHW6 NUP160 NUP160 NUP188 NUP188 A0A4W2CSP1 A0A4W2CSP1 A0A4W2CUJ6 A0A4W2CUJ6 A0A4W2CUU2 A0A4W2CUU2 NUP205 NUP205 A0A4W2CY87 A0A4W2CY87 A0A4W2D280 A0A4W2D280 A0A4W2D6U7 A0A4W2D6U7 LOC113887714 LOC113887714 NUP214 NUP214 LOC113890991 LOC113890991 LOC113894257 LOC113894257 A0A4W2DBN9 A0A4W2DBN9 A0A4W2DBR6 A0A4W2DBR6 LOC113891642 LOC113891642 NUP42 NUP42 RAE1 RAE1 NDC1 NDC1 A0A4W2DGW5 A0A4W2DGW5 NUP210L NUP210L POLR2J POLR2J A0A4W2DLX6 A0A4W2DLX6 NUP210 NUP210 A0A4W2DP28 A0A4W2DP28 HIST2H2BF HIST2H2BF A0A4W2DRH1 A0A4W2DRH1 A0A4W2DS81 A0A4W2DS81 A0A4W2DT21 A0A4W2DT21 A0A4W2DVZ3 A0A4W2DVZ3 LOC113888629 LOC113888629 TPR TPR A0A4W2DZL0 A0A4W2DZL0 NUP93 NUP93 NUP88 NUP88 NUP133 NUP133 HIST1H2AK HIST1H2AK A0A4W2E7G3 A0A4W2E7G3 LOC113894712 LOC113894712 ADGRD1 ADGRD1 A0A4W2E9V8 A0A4W2E9V8 A0A4W2EBF5 A0A4W2EBF5 NUP98 NUP98 H2AFV H2AFV A0A4W2EHM9 A0A4W2EHM9 NUP107 NUP107 POLR2I POLR2I A0A4W2EKY1 A0A4W2EKY1 A0A4W2EN35 A0A4W2EN35 A0A4W2END9 A0A4W2END9 AAAS AAAS A0A4W2EPN0 A0A4W2EPN0 A0A4W2EST9 A0A4W2EST9 LOC113895600 LOC113895600 HIST2H2BE HIST2H2BE HIST2H2AC HIST2H2AC LOC113891914 LOC113891914 AGO1 AGO1 HIST3H2BB HIST3H2BB LOC113894093 LOC113894093 NUP37 NUP37 POLR2D POLR2D A0A4W2F316 A0A4W2F316 A0A4W2F4C0 A0A4W2F4C0 LOC113877969 LOC113877969 NUP155 NUP155 POLR2B POLR2B H2AFJ H2AFJ LOC113881709 LOC113881709 A0A4W2FLL3 A0A4W2FLL3 HIST1H2BA HIST1H2BA A0A4W2FP88 A0A4W2FP88 POLR2C POLR2C IPO7 IPO7 NUP43 NUP43 POLR2H POLR2H LOC113902148 LOC113902148 A0A4W2H495 A0A4W2H495 A0A4W2H524 A0A4W2H524 HIST3H3 HIST3H3 NUP35 NUP35 POM121C POM121C A0A4W2HJD3 A0A4W2HJD3 HIST1H2AC HIST1H2AC POLR2G POLR2G LOC113887118 LOC113887118 A0A4W2ILK0 A0A4W2ILK0
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A4W2DXQ9Histone domain-containing protein; Belongs to the histone H2B family. (153 aa)
NUP58Nucleoporin 58. (586 aa)
SEH1LSEH1 like nucleoporin; Belongs to the WD repeat SEC13 family. (360 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
NUP50Nucleoporin 50. (465 aa)
A0A4W2BY98Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
POLR2ERNA polymerase II subunit E. (288 aa)
A0A4W2BZU2Histone domain-containing protein; Belongs to the histone H2B family. (165 aa)
A0A4W2C3R7Histone H2B; Belongs to the histone H2B family. (126 aa)
AGO2Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] (860 aa)
LOC113881683Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC113881951Histone H3; Belongs to the histone H3 family. (136 aa)
LOC113887723Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC113881235Histone H2B; Belongs to the histone H2B family. (127 aa)
POLR2FUncharacterized protein. (127 aa)
NUP85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (656 aa)
A0A4W2C6E9Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (136 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2019 aa)
A0A4W2C6H8Histone H2B; Belongs to the histone H2B family. (147 aa)
A0A4W2C7C4Histone H2B; Belongs to the histone H2B family. (126 aa)
SEC13SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (325 aa)
A0A4W2CAS1Histone domain-containing protein; Belongs to the histone H2B family. (122 aa)
A0A4W2CDJ5Histone H2B; Belongs to the histone H2B family. (122 aa)
RANGTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (216 aa)
A0A4W2CG17Histone domain-containing protein; Belongs to the histone H2B family. (124 aa)
A0A4W2CGH5Histone H2B; Belongs to the histone H2B family. (125 aa)
RANBP2RAN binding protein 2. (3143 aa)
A0A4W2CHW6Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
NUP160Nucleoporin 160. (1402 aa)
NUP188Nucleoporin 188. (2017 aa)
A0A4W2CSP1Uncharacterized protein. (319 aa)
A0A4W2CUJ6Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
A0A4W2CUU2Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
NUP205Nucleoporin 205. (2024 aa)
A0A4W2CY87Uncharacterized protein. (97 aa)
A0A4W2D280Histone H2B; Belongs to the histone H2B family. (67 aa)
A0A4W2D6U7Histone H2B; Belongs to the histone H2B family. (67 aa)
LOC113887714Histone H2A; Belongs to the histone H2A family. (130 aa)
NUP214Nucleoporin 214. (2141 aa)
LOC113890991Histone H2B; Belongs to the histone H2B family. (122 aa)
LOC113894257Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
A0A4W2DBN9Histone H2B; Belongs to the histone H2B family. (149 aa)
A0A4W2DBR6Histone domain-containing protein; Belongs to the histone H2B family. (67 aa)
LOC113891642Histone domain-containing protein. (136 aa)
NUP42Nucleoporin 42. (420 aa)
RAE1Ribonucleic acid export 1. (367 aa)
NDC1NDC1 transmembrane nucleoporin. (784 aa)
A0A4W2DGW5Histone domain-containing protein; Belongs to the histone H2B family. (118 aa)
NUP210LNucleoporin 210 like. (1883 aa)
POLR2JRNA_pol_L_2 domain-containing protein. (248 aa)
A0A4W2DLX6Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
NUP210Nucleoporin 210. (1889 aa)
A0A4W2DP28GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (216 aa)
HIST2H2BFHistone H2B; Belongs to the histone H2B family. (140 aa)
A0A4W2DRH1Histone H2B; Belongs to the histone H2B family. (126 aa)
A0A4W2DS81Histone domain-containing protein; Belongs to the histone H2B family. (112 aa)
A0A4W2DT21Histone domain-containing protein; Belongs to the histone H2B family. (69 aa)
A0A4W2DVZ3Histone domain-containing protein; Belongs to the histone H2B family. (67 aa)
LOC113888629Histone H2B; Belongs to the histone H2B family. (126 aa)
TPRTranslocated promoter region, nuclear basket protein. (2444 aa)
A0A4W2DZL0Histone H2B; Belongs to the histone H2B family. (126 aa)
NUP93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (819 aa)
NUP88Nucleoporin 88. (741 aa)
NUP133Nucleoporin 133. (1156 aa)
HIST1H2AKHistone H2A; Belongs to the histone H2A family. (130 aa)
A0A4W2E7G3RNA_pol_L_2 domain-containing protein. (119 aa)
LOC113894712Histone domain-containing protein; Belongs to the histone H2B family. (126 aa)
ADGRD1Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family. (902 aa)
A0A4W2E9V8Histone domain-containing protein; Belongs to the histone H2B family. (126 aa)
A0A4W2EBF5GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (216 aa)
NUP98Nucleoporin 98. (1816 aa)
H2AFVHistone H2A; Belongs to the histone H2A family. (128 aa)
A0A4W2EHM9Uncharacterized protein. (194 aa)
NUP107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (960 aa)
POLR2IRNA polymerase II subunit I. (156 aa)
A0A4W2EKY1Histone H2B; Belongs to the histone H2B family. (67 aa)
A0A4W2EN35Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
A0A4W2END9Histone H2B; Belongs to the histone H2B family. (67 aa)
AAASAladin WD repeat nucleoporin. (547 aa)
A0A4W2EPN0Histone domain-containing protein; Belongs to the histone H2B family. (126 aa)
A0A4W2EST9Histone H3; Belongs to the histone H3 family. (136 aa)
LOC113895600Histone H2B; Belongs to the histone H2B family. (126 aa)
HIST2H2BEHistone H2B; Belongs to the histone H2B family. (126 aa)
HIST2H2ACHistone H2A; Belongs to the histone H2A family. (129 aa)
LOC113891914Histone domain-containing protein; Belongs to the histone H2B family. (126 aa)
AGO1Argonaute RISC component 1; Belongs to the argonaute family. (1038 aa)
HIST3H2BBHistone H2B; Belongs to the histone H2B family. (126 aa)
LOC113894093Histone H2A; Belongs to the histone H2A family. (128 aa)
NUP37Nucleoporin 37. (326 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
A0A4W2F316Histone domain-containing protein; Belongs to the histone H2B family. (112 aa)
A0A4W2F4C0Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC113877969Histone H3; Belongs to the histone H3 family. (136 aa)
NUP155Nucleoporin 155. (1449 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
H2AFJHistone H2A; Belongs to the histone H2A family. (129 aa)
LOC113881709Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
A0A4W2FLL3Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (99 aa)
HIST1H2BAHistone H2B; Belongs to the histone H2B family. (127 aa)
A0A4W2FP88Histone domain-containing protein. (184 aa)
POLR2CRNA polymerase II subunit C. (275 aa)
IPO7Importin 7. (1038 aa)
NUP43Nucleoporin 43. (380 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
LOC113902148Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
A0A4W2H495Histone H2A; Belongs to the histone H2A family. (93 aa)
A0A4W2H524Histone domain-containing protein; Belongs to the histone H2B family. (67 aa)
HIST3H3Histone H3; Belongs to the histone H3 family. (136 aa)
NUP35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (327 aa)
POM121CUncharacterized protein. (1216 aa)
A0A4W2HJD3Histone domain-containing protein; Belongs to the histone H2B family. (126 aa)
HIST1H2ACHistone H2A; Belongs to the histone H2A family. (130 aa)
POLR2GRNA polymerase II subunit G. (172 aa)
LOC113887118Histone H2A; Belongs to the histone H2A family. (109 aa)
A0A4W2ILK0Histone domain-containing protein; Belongs to the histone H2B family. (118 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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