STRINGSTRING
DAW1 DAW1 CZIB CZIB C19orf54 C19orf54 LOC113897490 LOC113897490 RBM17 RBM17 THOC1 THOC1 SNRPE SNRPE SNRPA1 SNRPA1 PRPF8 PRPF8 TMEM59L TMEM59L PRPF38B PRPF38B USP39 USP39 HSPA8 HSPA8 SLC30A7 SLC30A7 RBM5 RBM5 BTBD9 BTBD9 PQBP1 PQBP1 WBP11 WBP11 SF3B1 SF3B1 U2AF1L4 U2AF1L4 YBX1 YBX1 SF3A1 SF3A1 A0A4W2F4L8 A0A4W2F4L8 A0A4W2F479 A0A4W2F479 IFI44 IFI44 SLU7 SLU7 SOX30 SOX30 HSPA6 HSPA6 HSPA13 HSPA13 A0A4W2F0M1 A0A4W2F0M1 MAGOH MAGOH ZMAT2 ZMAT2 MAGOHB MAGOHB SYF2 SYF2 PDCL2 PDCL2 HNRNPA3 HNRNPA3 MTMR11 MTMR11 AGGF1 AGGF1 A0A4W2EU75 A0A4W2EU75 A0A4W2EU39 A0A4W2EU39 HNRNPK HNRNPK ZNF804A ZNF804A LSM7 LSM7 SRSF5 SRSF5 LYRM7 LYRM7 TRA2B TRA2B ACIN1 ACIN1 ZC2HC1C ZC2HC1C SNW1 SNW1 RNPC3 RNPC3 WDR53 WDR53 TMIGD2 TMIGD2 SAFB2 SAFB2 SAFB SAFB A0A4W2ENU2 A0A4W2ENU2 L3MBTL1 L3MBTL1 TOPORS TOPORS DHX35 DHX35 SNRNP200 SNRNP200 MAPRE3 MAPRE3 CTNNBL1 CTNNBL1 A0A4W2EMR3 A0A4W2EMR3 AQR AQR SRSF12 SRSF12 SF3B6 SF3B6 RALY RALY PRPF6 PRPF6 SLC30A5 SLC30A5 NCBP1 NCBP1 A0A4W2EGB2 A0A4W2EGB2 A0A4W2EFS0 A0A4W2EFS0 A0A4W2EFI8 A0A4W2EFI8 PUF60 PUF60 DHX32 DHX32 R3HCC1L R3HCC1L TCERG1L TCERG1L A0A4W2EF32 A0A4W2EF32 PPIL1 PPIL1 SRSF7 SRSF7 UHRF1BP1 UHRF1BP1 GPATCH2 GPATCH2 CDC5L CDC5L A0A4W2ECI1 A0A4W2ECI1 SRSF4 SRSF4 SF3B3 SF3B3 A0A4W2E935 A0A4W2E935 DQX1 DQX1 A0A4W2E7T6 A0A4W2E7T6 SLC30A6 SLC30A6 DHX34 DHX34 CDC40 CDC40 A0A4W2E3F9 A0A4W2E3F9 SNRPB2 SNRPB2 DHX16 DHX16 BTBD16 BTBD16 DDX51 DDX51 U2AF1 U2AF1 CWC27 CWC27 SRSF3 SRSF3 A0A4W2E078 A0A4W2E078 DDX5 DDX5 RBM22 RBM22 CWC15 CWC15 TCERG1 TCERG1 EIF4A3 EIF4A3 UBAP2L UBAP2L SNU13 SNU13 LSM6 LSM6 ISY1 ISY1 A0A4W2DT27 A0A4W2DT27 A0A4W2DT24 A0A4W2DT24 DDX50 DDX50 A0A4W2DSB5 A0A4W2DSB5 RBM10 RBM10 A0A4W2DRW3 A0A4W2DRW3 A0A4W2DRN1 A0A4W2DRN1 A0A4W2DQH5 A0A4W2DQH5 ZRSR2 ZRSR2 A0A4W2DQ11 A0A4W2DQ11 A0A4W2DML3 A0A4W2DML3 PRPF19 PRPF19 CHERP CHERP A0A4W2DIR9 A0A4W2DIR9 DHX15 DHX15 A0A4W2DI62 A0A4W2DI62 HNRNPA0 HNRNPA0 A0A4W2DH17 A0A4W2DH17 THOC2 THOC2 A0A4W2DFX9 A0A4W2DFX9 LDLRAD1 LDLRAD1 TMEM59 TMEM59 TRA2A TRA2A SF3B4 SF3B4 HNRNPDL HNRNPDL GPR149 GPR149 A0A4W2DA51 A0A4W2DA51 A0A4W2DA25 A0A4W2DA25 PPIH PPIH SRSF10 SRSF10 PRPF18 PRPF18 A0A4W2CGW0 A0A4W2CGW0 SNRPC SNRPC A0A4W2CG13 A0A4W2CG13 TDRD12 TDRD12 TXNL4B TXNL4B LSM5-2 LSM5-2 SNRPA SNRPA DHX8 DHX8 DDX42 DDX42 EFTUD2 EFTUD2 RALYL RALYL ALYREF ALYREF SNRPD1-2 SNRPD1-2 YTHDC2 YTHDC2 LSM5 LSM5 ZC3H13 ZC3H13 WDR25 WDR25 THOC3 THOC3 ZNF318 ZNF318 DDX17 DDX17 LSM2 LSM2 A0A4W2C1B0 A0A4W2C1B0 A0A4W2C164 A0A4W2C164 SMNDC1 SMNDC1 A0A4W2BY83 A0A4W2BY83 RBM14 RBM14 HSPA12A HSPA12A RBM6 RBM6 SART1 SART1 CCDC12 CCDC12 A0A4W2BS63 A0A4W2BS63 A0A4W2BS61 A0A4W2BS61 A0A4W2BRU2 A0A4W2BRU2 LSM3 LSM3 FUS FUS MAPRE2 MAPRE2 A0A4W2BPQ2 A0A4W2BPQ2 SNRPD1 SNRPD1 A0A4W2BMG6 A0A4W2BMG6 BUD31 BUD31 A0A4W2D9G8 A0A4W2D9G8 PPIE PPIE HSPA12B HSPA12B A0A4W2D8N8 A0A4W2D8N8 R3HCC1 R3HCC1 MYEF2 MYEF2 TAPT1 TAPT1 PRPF3 PRPF3 A0A4W2D6Y1 A0A4W2D6Y1 A0A4W2D616 A0A4W2D616 LSM5-3 LSM5-3 SLIRP SLIRP C10orf71 C10orf71 PRPF4 PRPF4 HSPA2 HSPA2 HNRNPM HNRNPM SNRNP27 SNRNP27 TIA1 TIA1 RBM25 RBM25 SF3A2 SF3A2 PRPF40B PRPF40B GPATCH2L GPATCH2L DDX23 DDX23 HNRNPA1 HNRNPA1 PDCL3 PDCL3 A0A4W2CYM3 A0A4W2CYM3 SNRPG SNRPG SRSF6 SRSF6 HNRNPU HNRNPU A0A4W2CVU9 A0A4W2CVU9 DHX38 DHX38 LSM8 LSM8 MAPRE1 MAPRE1 SNRPB SNRPB ZNF804B ZNF804B L3MBTL3 L3MBTL3 A0A4W2CQ28 A0A4W2CQ28 A0A4W2CP57 A0A4W2CP57 DDX59 DDX59 U2AF2 U2AF2 PRPF31 PRPF31 SNRNP70 SNRNP70 SNRPD1-3 SNRPD1-3 WAC WAC PLRG1 PLRG1 A0A4W2IAG7 A0A4W2IAG7 TADA1 TADA1 NAA38 NAA38 HSPA1L HSPA1L DDX21 DDX21 DDX39B DDX39B SF3B2 SF3B2 PRPF38A PRPF38A LSM4 LSM4 SNRPD3 SNRPD3 DDX46 DDX46 XAB2 XAB2 SNRNP40 SNRNP40 BTBD19 BTBD19 CRNKL1 CRNKL1 SRSF2 SRSF2 PCBP1 PCBP1 U2SURP U2SURP A0A4W2HAY4 A0A4W2HAY4 NCBP2 NCBP2 PHF5A PHF5A POLDIP3 POLDIP3 RBM24 RBM24 LSM10 LSM10 SF3A3 SF3A3 SRSF9 SRSF9 SRSF1 SRSF1 A0A4W2H082 A0A4W2H082 HSPA14 HSPA14 SNRPN SNRPN SF3B5 SF3B5 HNRNPAB HNRNPAB SNRPD2 SNRPD2 TIAL1 TIAL1 HNRNPC HNRNPC PRPF40A PRPF40A BCAS2 BCAS2 DDX39A DDX39A SPACA6 SPACA6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DAW1Dynein assembly factor with WD repeats 1. (447 aa)
CZIBCXXC motif containing zinc binding protein. (160 aa)
C19orf54Chromosome 19 open reading frame 54. (348 aa)
LOC113897490Uncharacterized protein. (730 aa)
RBM17RNA binding motif protein 17. (401 aa)
THOC1THO complex 1. (657 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
SNRPA1LRRcap domain-containing protein. (255 aa)
PRPF8Pre-mRNA processing factor 8. (2335 aa)
TMEM59LTransmembrane protein 59 like. (349 aa)
PRPF38BUncharacterized protein. (543 aa)
USP39Ubiquitin specific peptidase 39. (565 aa)
HSPA8Heat shock protein family A (Hsp70) member 8; Belongs to the heat shock protein 70 family. (650 aa)
SLC30A7Solute carrier family 30 member 7. (376 aa)
RBM5RNA binding motif protein 5. (815 aa)
BTBD9BTB domain containing 9. (690 aa)
PQBP1Polyglutamine binding protein 1. (263 aa)
WBP11Uncharacterized protein. (640 aa)
SF3B1Splicing factor 3b subunit 1. (1304 aa)
U2AF1L4Uncharacterized protein. (228 aa)
YBX1Y-box binding protein 1. (324 aa)
SF3A1Splicing factor 3a subunit 1. (793 aa)
A0A4W2F4L8Uncharacterized protein. (369 aa)
A0A4W2F479Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
IFI44Interferon induced protein 44. (429 aa)
SLU7SLU7 homolog, splicing factor. (586 aa)
SOX30SRY-box transcription factor 30. (757 aa)
HSPA6Heat shock protein family A (Hsp70) member 6; Belongs to the heat shock protein 70 family. (639 aa)
HSPA13Heat shock protein family A (Hsp70) member 13. (478 aa)
A0A4W2F0M1Uncharacterized protein. (320 aa)
MAGOHMago homolog, exon junction complex subunit. (146 aa)
ZMAT2Zinc finger matrin-type 2. (199 aa)
MAGOHBMago homolog B, exon junction complex subunit. (148 aa)
SYF2SYF2 pre-mRNA splicing factor. (245 aa)
PDCL2Phosducin like 2. (242 aa)
HNRNPA3Heterogeneous nuclear ribonucleoprotein A3. (380 aa)
MTMR11Myotubularin related protein 11. (698 aa)
AGGF1Uncharacterized protein. (712 aa)
A0A4W2EU75Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (122 aa)
A0A4W2EU39Uncharacterized protein. (270 aa)
HNRNPKUncharacterized protein. (464 aa)
ZNF804AZinc finger protein 804A. (1208 aa)
LSM7LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (103 aa)
SRSF5Serine and arginine rich splicing factor 5. (272 aa)
LYRM7LYR motif containing 7; Belongs to the complex I LYR family. (136 aa)
TRA2BTransformer 2 beta homolog. (288 aa)
ACIN1Apoptotic chromatin condensation inducer 1. (1334 aa)
ZC2HC1CZinc finger C2HC-type containing 1C. (530 aa)
SNW1SNW domain containing 1. (536 aa)
RNPC3RNA binding region (RNP1, RRM) containing 3. (521 aa)
WDR53WD repeat domain 53. (358 aa)
TMIGD2Ig-like domain-containing protein. (426 aa)
SAFB2Scaffold attachment factor B2. (1052 aa)
SAFBScaffold attachment factor B. (1596 aa)
A0A4W2ENU2Uncharacterized protein. (105 aa)
L3MBTL1Uncharacterized protein. (864 aa)
TOPORSTOP1 binding arginine/serine rich protein. (1037 aa)
DHX35DEAH-box helicase 35. (703 aa)
SNRNP200Small nuclear ribonucleoprotein U5 subunit 200. (2136 aa)
MAPRE3Microtubule associated protein RP/EB family member 3. (281 aa)
CTNNBL1Catenin beta like 1. (619 aa)
A0A4W2EMR3RRM domain-containing protein. (115 aa)
AQRRNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. (1484 aa)
SRSF12Uncharacterized protein. (298 aa)
SF3B6Splicing factor 3b subunit 6. (125 aa)
RALYRALY heterogeneous nuclear ribonucleoprotein. (331 aa)
PRPF6Pre-mRNA processing factor 6. (1044 aa)
SLC30A5Solute carrier family 30 member 5. (769 aa)
NCBP1Nuclear cap binding protein subunit 1. (790 aa)
A0A4W2EGB2Uncharacterized protein. (364 aa)
A0A4W2EFS0Uncharacterized protein. (168 aa)
A0A4W2EFI8RRM domain-containing protein. (396 aa)
PUF60Poly(U) binding splicing factor 60. (562 aa)
DHX32DEAH-box helicase 32 (putative). (744 aa)
R3HCC1LR3H domain and coiled-coil containing 1 like. (786 aa)
TCERG1LTranscription elongation regulator 1 like. (668 aa)
A0A4W2EF32Uncharacterized protein. (300 aa)
PPIL1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
SRSF7Serine and arginine rich splicing factor 7. (235 aa)
UHRF1BP1UHRF1 binding protein 1. (1443 aa)
GPATCH2G-patch domain containing 2. (529 aa)
CDC5LCell division cycle 5 like. (802 aa)
A0A4W2ECI1Uncharacterized protein. (138 aa)
SRSF4Serine and arginine rich splicing factor 4. (493 aa)
SF3B3Splicing factor 3b subunit 3. (1217 aa)
A0A4W2E935Sm domain-containing protein. (81 aa)
DQX1DEAQ-box RNA dependent ATPase 1. (719 aa)
A0A4W2E7T6Uncharacterized protein. (389 aa)
SLC30A6Solute carrier family 30 member 6. (438 aa)
DHX34DExH-box helicase 34. (1146 aa)
CDC40Cell division cycle 40. (611 aa)
A0A4W2E3F9Uncharacterized protein. (374 aa)
SNRPB2Uncharacterized protein. (225 aa)
DHX16DEAH-box helicase 16. (1045 aa)
BTBD16BTB domain containing 16. (506 aa)
DDX51DEAD-box helicase 51; Belongs to the DEAD box helicase family. (649 aa)
U2AF1Uncharacterized protein. (237 aa)
CWC27CWC27 spliceosome associated cyclophilin. (473 aa)
SRSF3Serine and arginine rich splicing factor 3. (125 aa)
A0A4W2E078RRM domain-containing protein. (154 aa)
DDX5DEAD-box helicase 5; Belongs to the DEAD box helicase family. (614 aa)
RBM22RNA binding motif protein 22. (420 aa)
CWC15CWC15 spliceosome associated protein homolog. (238 aa)
TCERG1Transcription elongation regulator 1. (1102 aa)
EIF4A3Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (411 aa)
UBAP2LUbiquitin associated protein 2 like. (1087 aa)
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
LSM6Sm domain-containing protein. (101 aa)
ISY1Uncharacterized protein. (284 aa)
A0A4W2DT27RRM domain-containing protein. (92 aa)
A0A4W2DT24BTB domain-containing protein. (489 aa)
DDX50DExD-box helicase 50. (737 aa)
A0A4W2DSB5Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
RBM10RNA binding motif protein 10. (995 aa)
A0A4W2DRW3Uncharacterized protein. (86 aa)
A0A4W2DRN1RRM domain-containing protein. (91 aa)
A0A4W2DQH5Uncharacterized protein. (107 aa)
ZRSR2Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2. (452 aa)
A0A4W2DQ11RRM domain-containing protein. (101 aa)
A0A4W2DML3Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (64 aa)
PRPF19Pre-mRNA processing factor 19. (504 aa)
CHERPCalcium homeostasis endoplasmic reticulum protein. (927 aa)
A0A4W2DIR9LRRcap domain-containing protein. (360 aa)
DHX15DEAH-box helicase 15. (795 aa)
A0A4W2DI62BTB domain-containing protein. (526 aa)
HNRNPA0Heterogeneous nuclear ribonucleoprotein A0. (314 aa)
A0A4W2DH17Uncharacterized protein. (419 aa)
THOC2THO complex 2. (1584 aa)
A0A4W2DFX9RRM domain-containing protein. (115 aa)
LDLRAD1Low density lipoprotein receptor class A domain containing 1. (227 aa)
TMEM59Uncharacterized protein. (334 aa)
TRA2ATransformer 2 alpha homolog. (281 aa)
SF3B4Uncharacterized protein. (424 aa)
HNRNPDLHeterogeneous nuclear ribonucleoprotein D like. (420 aa)
GPR149G protein-coupled receptor 149. (746 aa)
A0A4W2DA51Uncharacterized protein. (357 aa)
A0A4W2DA25Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
PPIHPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (273 aa)
SRSF10Serine and arginine rich splicing factor 10. (262 aa)
PRPF18SFM domain-containing protein. (364 aa)
A0A4W2CGW0Uncharacterized protein. (102 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (207 aa)
A0A4W2CG13Uncharacterized protein. (75 aa)
TDRD12CS domain-containing protein. (1300 aa)
TXNL4BThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
LSM5-2U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
SNRPASmall nuclear ribonucleoprotein polypeptide A. (282 aa)
DHX8DEAH-box helicase 8. (1220 aa)
DDX42DEAD-box helicase 42. (947 aa)
EFTUD2Elongation factor Tu GTP binding domain containing 2. (1004 aa)
RALYLRALY RNA binding protein like. (293 aa)
ALYREFAly/REF export factor. (263 aa)
SNRPD1-2Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
YTHDC2YTH domain containing 2. (1429 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (81 aa)
ZC3H13Zinc finger CCCH-type containing 13. (1651 aa)
WDR25WD repeat domain 25. (567 aa)
THOC3THO complex 3. (351 aa)
ZNF318Zinc finger protein 318. (2275 aa)
DDX17DEAD-box helicase 17; Belongs to the DEAD box helicase family. (650 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
A0A4W2C1B0RRM domain-containing protein. (185 aa)
A0A4W2C164Uncharacterized protein; Belongs to the heat shock protein 70 family. (715 aa)
SMNDC1Survival motor neuron domain containing 1. (259 aa)
A0A4W2BY83Phosducin domain-containing protein. (244 aa)
RBM14RNA binding motif protein 14. (669 aa)
HSPA12AHeat shock protein family A (Hsp70) member 12A. (692 aa)
RBM6RNA binding motif protein 6. (1120 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (802 aa)
CCDC12Coiled-coil domain containing 12. (168 aa)
A0A4W2BS63G-patch domain-containing protein. (368 aa)
A0A4W2BS61Uncharacterized protein. (262 aa)
A0A4W2BRU2Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (68 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
FUSFUS RNA binding protein. (512 aa)
MAPRE2Microtubule associated protein RP/EB family member 2. (322 aa)
A0A4W2BPQ2RRM domain-containing protein. (188 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
A0A4W2BMG6RRM domain-containing protein. (387 aa)
BUD31BUD31 homolog. (144 aa)
A0A4W2D9G8Uncharacterized protein. (221 aa)
PPIEPeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
HSPA12BHeat shock protein family A (Hsp70) member 12B. (686 aa)
A0A4W2D8N8Sm domain-containing protein. (80 aa)
R3HCC1R3H domain and coiled-coil containing 1. (568 aa)
MYEF2Myelin expression factor 2. (576 aa)
TAPT1Transmembrane anterior posterior transformation 1. (761 aa)
PRPF3Pre-mRNA processing factor 3. (699 aa)
A0A4W2D6Y1Uncharacterized protein. (358 aa)
A0A4W2D616RRM domain-containing protein. (282 aa)
LSM5-3U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
SLIRPSRA stem-loop interacting RNA binding protein. (117 aa)
C10orf71Chromosome 10 open reading frame 71. (1435 aa)
PRPF4Pre-mRNA processing factor 4. (521 aa)
HSPA2Heat shock protein family A (Hsp70) member 2; Belongs to the heat shock protein 70 family. (636 aa)
HNRNPMHeterogeneous nuclear ribonucleoprotein M. (730 aa)
SNRNP27Small nuclear ribonucleoprotein U4/U6.U5 subunit 27. (222 aa)
TIA1TIA1 cytotoxic granule associated RNA binding protein. (386 aa)
RBM25RNA binding motif protein 25. (843 aa)
SF3A2Splicing factor 3a subunit 2. (477 aa)
PRPF40BPre-mRNA processing factor 40 homolog B. (915 aa)
GPATCH2LG-patch domain containing 2 like. (601 aa)
DDX23DEAD-box helicase 23. (909 aa)
HNRNPA1Heterogeneous nuclear ribonucleoprotein A1. (373 aa)
PDCL3Phosducin like 3. (240 aa)
A0A4W2CYM3Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (77 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
SRSF6Serine and arginine rich splicing factor 6. (345 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U. (806 aa)
A0A4W2CVU9RRM domain-containing protein. (349 aa)
DHX38DEAH-box helicase 38. (1227 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
MAPRE1Microtubule associated protein RP/EB family member 1. (295 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (231 aa)
ZNF804BZinc finger protein 804B. (1348 aa)
L3MBTL3L3MBTL histone methyl-lysine binding protein 3. (779 aa)
A0A4W2CQ28RRM domain-containing protein. (212 aa)
A0A4W2CP57Uncharacterized protein. (285 aa)
DDX59DEAD-box helicase 59. (620 aa)
U2AF2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (494 aa)
PRPF31Pre-mRNA processing factor 31. (522 aa)
SNRNP70Small nuclear ribonucleoprotein U1 subunit 70. (440 aa)
SNRPD1-3Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (120 aa)
WACWW domain containing adaptor with coiled-coil. (646 aa)
PLRG1Pleiotropic regulator 1. (513 aa)
A0A4W2IAG7Sm domain-containing protein. (65 aa)
TADA1Transcriptional adaptor 1. (335 aa)
NAA38N(alpha)-acetyltransferase 38, NatC auxiliary subunit. (126 aa)
HSPA1LHeat shock protein family A (Hsp70) member 1 like; Belongs to the heat shock protein 70 family. (641 aa)
DDX21DExD-box helicase 21. (784 aa)
DDX39BDExD-box helicase 39B. (428 aa)
SF3B2Splicing factor 3b subunit 2. (895 aa)
PRPF38APre-mRNA processing factor 38A. (312 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (139 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
DDX46DEAD-box helicase 46. (1032 aa)
XAB2XPA binding protein 2. (855 aa)
SNRNP40Small nuclear ribonucleoprotein U5 subunit 40. (358 aa)
BTBD19BTB domain containing 19. (291 aa)
CRNKL1Crooked neck pre-mRNA splicing factor 1. (693 aa)
SRSF2RRM domain-containing protein. (221 aa)
PCBP1Poly(rC) binding protein 1. (328 aa)
U2SURPU2 snRNP associated SURP domain containing. (1029 aa)
A0A4W2HAY4BTB domain-containing protein. (475 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
PHF5APHD finger protein 5A. (110 aa)
POLDIP3DNA polymerase delta interacting protein 3. (392 aa)
RBM24RNA binding motif protein 24. (236 aa)
LSM10LSM10, U7 small nuclear RNA associated. (122 aa)
SF3A3Splicing factor 3a subunit 3. (501 aa)
SRSF9Uncharacterized protein. (221 aa)
SRSF1Uncharacterized protein. (248 aa)
A0A4W2H082Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (68 aa)
HSPA14Heat shock protein family A (Hsp70) member 14. (821 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein. (240 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
HNRNPABHeterogeneous nuclear ribonucleoprotein A/B. (332 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
TIAL1TIA1 cytotoxic granule associated RNA binding protein like 1. (392 aa)
HNRNPCRRM domain-containing protein. (307 aa)
PRPF40APre-mRNA processing factor 40 homolog A. (929 aa)
BCAS2BCAS2 pre-mRNA processing factor. (225 aa)
DDX39ADExD-box helicase 39A. (427 aa)
SPACA6Sperm acrosome associated 6. (323 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
Server load: low (38%) [HD]