(17 nodes) Mixed, incl. HSP90 chaperone cycle for steroid hormone receptors (SHR) in the presence of ligand, and Activator of Hsp90 ATPase, Aha1 network (Chlamydomonas reinhardtii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2K3D3K8	Uncharacterized protein. (396 aa)
	A0A2K3D5I0	Uncharacterized protein. (1295 aa)
	A0A2K3DBR2	TPR_REGION domain-containing protein. (220 aa)
	A0A2K3DG66	Aha1_N domain-containing protein. (173 aa)
	A0A2K3DHL3	TPR_REGION domain-containing protein. (423 aa)
	A0A2K3DIC3	Uncharacterized protein. (1533 aa)
	A0A2K3DJ31	Aha1_N domain-containing protein. (197 aa)
	A0A2K3DMC7	Uncharacterized protein. (775 aa)
	A0A2K3DMS0	Uncharacterized protein. (925 aa)
	CYN51	PPIase cyclophilin-type domain-containing protein. (348 aa)
	SSA15	Uncharacterized protein. (620 aa)
	A0A2K3DZH5	Aha1_N domain-containing protein. (355 aa)
	A0A2K3E1Z8	TPR_REGION domain-containing protein. (360 aa)
	A0A2K3E3H0	J domain-containing protein. (979 aa)
	CYN40	Peptidyl-prolyl cis-trans isomerase, cyclophilin-type. (377 aa)
	A8ITQ1_CHLRE	P23 co-chaperone of HSP90 system. (215 aa)
	A8IVK8_CHLRE	Predicted protein. (105 aa)

Your Current Organism:

Chlamydomonas reinhardtii

NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K3D3K8	A0A2K3D5I0	A0A2K3D3K8	A0A2K3D5I0	Uncharacterized protein.	Uncharacterized protein.	0.459
A0A2K3D3K8	A0A2K3DBR2	A0A2K3D3K8	A0A2K3DBR2	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.459
A0A2K3D3K8	A0A2K3DG66	A0A2K3D3K8	A0A2K3DG66	Uncharacterized protein.	Aha1_N domain-containing protein.	0.685
A0A2K3D3K8	A0A2K3DHL3	A0A2K3D3K8	A0A2K3DHL3	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.459
A0A2K3D3K8	A0A2K3DIC3	A0A2K3D3K8	A0A2K3DIC3	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A2K3D3K8	A0A2K3DJ31	A0A2K3D3K8	A0A2K3DJ31	Uncharacterized protein.	Aha1_N domain-containing protein.	0.685
A0A2K3D3K8	A0A2K3DMC7	A0A2K3D3K8	A0A2K3DMC7	Uncharacterized protein.	Uncharacterized protein.	0.513
A0A2K3D3K8	A0A2K3DMS0	A0A2K3D3K8	A0A2K3DMS0	Uncharacterized protein.	Uncharacterized protein.	0.513
A0A2K3D3K8	A0A2K3DZH5	A0A2K3D3K8	A0A2K3DZH5	Uncharacterized protein.	Aha1_N domain-containing protein.	0.686
A0A2K3D3K8	A0A2K3E1Z8	A0A2K3D3K8	A0A2K3E1Z8	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.459
A0A2K3D3K8	A0A2K3E3H0	A0A2K3D3K8	A0A2K3E3H0	Uncharacterized protein.	J domain-containing protein.	0.428
A0A2K3D3K8	A8ITQ1_CHLRE	A0A2K3D3K8	A8ITQ1	Uncharacterized protein.	P23 co-chaperone of HSP90 system.	0.949
A0A2K3D3K8	A8IVK8_CHLRE	A0A2K3D3K8	A8IVK8	Uncharacterized protein.	Predicted protein.	0.428
A0A2K3D3K8	CYN40	A0A2K3D3K8	A8HN48	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase, cyclophilin-type.	0.445
A0A2K3D3K8	CYN51	A0A2K3D3K8	A0A2K3DMT1	Uncharacterized protein.	PPIase cyclophilin-type domain-containing protein.	0.445
A0A2K3D3K8	SSA15	A0A2K3D3K8	A0A2K3DVP9	Uncharacterized protein.	Uncharacterized protein.	0.459
A0A2K3D5I0	A0A2K3D3K8	A0A2K3D5I0	A0A2K3D3K8	Uncharacterized protein.	Uncharacterized protein.	0.459
A0A2K3D5I0	A0A2K3DG66	A0A2K3D5I0	A0A2K3DG66	Uncharacterized protein.	Aha1_N domain-containing protein.	0.409
A0A2K3D5I0	A0A2K3DIC3	A0A2K3D5I0	A0A2K3DIC3	Uncharacterized protein.	Uncharacterized protein.	0.666
A0A2K3D5I0	A0A2K3DJ31	A0A2K3D5I0	A0A2K3DJ31	Uncharacterized protein.	Aha1_N domain-containing protein.	0.409

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