(115 nodes) Mixed, incl. Nuclear transport, and Nuclear Envelope Breakdown network (Chlamydomonas reinhardtii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2K3CMQ5	Uncharacterized protein. (450 aa)
	A0A2K3CN14	Uncharacterized protein. (1528 aa)
	A0A2K3CNH9	Methyltranfer_dom domain-containing protein. (380 aa)
	A0A2K3CQ27	Nuclear pore protein. (952 aa)
	A0A2K3CRK0	WD_REPEATS_REGION domain-containing protein. (827 aa)
	A0A2K3CT54	Uncharacterized protein. (940 aa)
	A0A2K3CTE7	ANK_REP_REGION domain-containing protein. (2068 aa)
	A0A2K3CTV5	Uncharacterized protein. (598 aa)
	A0A2K3CU41	Uncharacterized protein. (471 aa)
	A0A2K3CU60	Uncharacterized protein. (1419 aa)
	A0A2K3CUA8	Uncharacterized protein. (1474 aa)
	A0A2K3CUP5	Uncharacterized protein. (205 aa)
	A0A2K3CUQ9	Importin N-terminal domain-containing protein. (943 aa)
	A0A2K3CVH4	Uncharacterized protein. (652 aa)
	A0A2K3CVN9	RRM domain-containing protein. (726 aa)
	A0A2K3CW45	PPIase cyclophilin-type domain-containing protein. (347 aa)
	CLR4	Uncharacterized protein. (832 aa)
	A0A2K3CWV1	RanBD1 domain-containing protein. (496 aa)
	CYN16	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (186 aa)
	A0A2K3CZ10	TOG domain-containing protein. (1129 aa)
	ITN7	Importin N-terminal domain-containing protein. (1042 aa)
	A0A2K3CZ89	Tr-type G domain-containing protein. (728 aa)
	A0A2K3D060	Uncharacterized protein. (2279 aa)
	A0A2K3D0S5	Uncharacterized protein. (2000 aa)
	A0A2K3D0V4	Uncharacterized protein. (748 aa)
	A0A2K3D0V6	Uncharacterized protein. (2607 aa)
	A0A2K3D1T8	Uncharacterized protein. (2330 aa)
	A0A2K3D1Z4	Uncharacterized protein. (676 aa)
	A0A2K3D3L2	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (1200 aa)
	A0A2K3D3W7	SECA_MOTOR_DEAD domain-containing protein. (426 aa)
	A0A2K3D415	Importin N-terminal domain-containing protein. (959 aa)
	A0A2K3D479	Uncharacterized protein. (1345 aa)
	A0A2K3D488	Uncharacterized protein. (987 aa)
	A0A2K3D549	Uncharacterized protein. (2535 aa)
	A0A2K3D606	RRM Nup35-type domain-containing protein. (268 aa)
	A0A2K3D698	U-box domain-containing protein. (487 aa)
	A0A2K3D6R8	Nup54 domain-containing protein. (467 aa)
	A0A2K3D847	Uncharacterized protein. (2705 aa)
	A0A2K3D855	WD_REPEATS_REGION domain-containing protein. (316 aa)
	A0A2K3D889	Uncharacterized protein. (669 aa)
	A0A2K3D893	Uncharacterized protein. (671 aa)
	A0A2K3D8J9	WPP domain-containing protein. (533 aa)
	A0A2K3D8T8	Uncharacterized protein. (1531 aa)
	A0A2K3D941	Uncharacterized protein. (215 aa)
	A0A2K3D946	Uncharacterized protein. (1297 aa)
	A0A2K3D9G6	Uncharacterized protein. (873 aa)
	A0A2K3D9H2	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (381 aa)
	A0A2K3DAJ1	Uncharacterized protein. (1561 aa)
	A0A2K3DC91	Uncharacterized protein. (636 aa)
	A0A2K3DD98	RanBD1 domain-containing protein. (246 aa)
	A0A2K3DDA3	Nucleoporin_N domain-containing protein. (1778 aa)
	A0A2K3DDX8	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (366 aa)
	A0A2K3DE54	WD_REPEATS_REGION domain-containing protein. (1690 aa)
	A0A2K3DEU8	GRIP domain-containing protein. (1872 aa)
	A0A2K3DF81	Uncharacterized protein. (474 aa)
	A0A2K3DFI3	Uncharacterized protein. (1108 aa)
	A0A2K3DGN7	Uncharacterized protein. (340 aa)
	A0A2K3DGS2	Uncharacterized protein. (430 aa)
	CPLD36	Uncharacterized protein. (141 aa)
	A0A2K3DHS6	Importin N-terminal domain-containing protein. (1233 aa)
	A0A2K3DI91	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (898 aa)
	A0A2K3DIV8	WD_REPEATS_REGION domain-containing protein. (449 aa)
	A0A2K3DJ79	Uncharacterized protein. (859 aa)
	A0A2K3DJ82	Uncharacterized protein. (1881 aa)
	A0A2K3DKW0	Uncharacterized protein. (1281 aa)
	A0A2K3DLP2	Uncharacterized protein. (399 aa)
	A0A2K3DM87	Uncharacterized protein. (515 aa)
	A0A2K3DP45	Uncharacterized protein. (1027 aa)
	A0A2K3DPJ7	Uncharacterized protein. (956 aa)
	A0A2K3DQW4	Uncharacterized protein. (432 aa)
	A0A2K3DQX7	Uncharacterized protein. (601 aa)
	A0A2K3DRG2	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (307 aa)
	A0A2K3DRJ8	Uncharacterized protein; Belongs to the DEAD box helicase family. (504 aa)
	A0A2K3DS97	Uncharacterized protein. (909 aa)
	A0A2K3DUH7	Uncharacterized protein. (500 aa)
	A0A2K3DUT8	TF-B3 domain-containing protein. (1074 aa)
	A0A2K3DVY1	Uncharacterized protein. (436 aa)
	A0A2K3DWA8	Uncharacterized protein. (374 aa)
	A0A2K3DWE7	Uncharacterized protein. (750 aa)
	A0A2K3DXH6	Uncharacterized protein. (2707 aa)
	A0A2K3DYB4	Uncharacterized protein. (1132 aa)
	A0A2K3DYR5	Uncharacterized protein. (593 aa)
	A0A2K3E031	Uncharacterized protein. (697 aa)
	A0A2K3E0E2	Importin N-terminal domain-containing protein. (1183 aa)
	A0A2K3E0U1	WD_REPEATS_REGION domain-containing protein. (1439 aa)
	A0A2K3E0Z7	Peptidase S59 domain-containing protein. (2327 aa)
	A0A2K3E175	Uncharacterized protein. (1256 aa)
	A0A2K3E1G3	Uncharacterized protein. (721 aa)
	A0A2K3E1P0	TPR_REGION domain-containing protein. (1630 aa)
	A0A2K3E1Q3	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (856 aa)
	A0A2K3E212	Importin N-terminal domain-containing protein. (1151 aa)
	A0A2K3E2A3	Uncharacterized protein. (1144 aa)
	A0A2K3E3B3	Uncharacterized protein. (1176 aa)
	A0A2K3E5D9	Uncharacterized protein. (2166 aa)
	A0A2K3E5I0	Uncharacterized protein. (786 aa)
	A0A2K3E5T3	Uncharacterized protein. (376 aa)
	A0A2K3E620	WD_REPEATS_REGION domain-containing protein. (587 aa)
	A0A2K3E6D9	Uncharacterized protein. (864 aa)
	A0A2K3E6J4	Uncharacterized protein. (594 aa)
	IPB1	Importin N-terminal domain-containing protein. (896 aa)
	A0A2K3E7N6	Uncharacterized protein. (657 aa)
	A0A2K3E7N7	Uncharacterized protein. (634 aa)
	A0A2K3E7Z1	Uncharacterized protein. (572 aa)
	A0A2K3E8E7	Uncharacterized protein. (1164 aa)
	CYN26	Peptidyl-prolyl cis-trans isomerase, cyclophilin-type. (313 aa)
	A8INH7_CHLRE	Predicted protein. (307 aa)
	RAN1	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (223 aa)
	SEC13L	COP-II coat subunit, nucleoporin; Belongs to the WD repeat SEC13 family. (338 aa)
	A8IXZ2_CHLRE	Predicted protein. (160 aa)
	XPO1	Exportin. (1075 aa)
	RAE1	mRNA export protein. (352 aa)
	IPA1	Importin subunit alpha; Belongs to the importin alpha family. (555 aa)
	A8JAH8_CHLRE	Predicted protein. (1077 aa)
	CYN19-2	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (172 aa)
	SEC13	COP-II coat subunit; Belongs to the WD repeat SEC13 family. (299 aa)

Your Current Organism:

Chlamydomonas reinhardtii

NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K3CN14	A0A2K3CU60	A0A2K3CN14	A0A2K3CU60	Uncharacterized protein.	Uncharacterized protein.	0.472
A0A2K3CN14	A0A2K3CUQ9	A0A2K3CN14	A0A2K3CUQ9	Uncharacterized protein.	Importin N-terminal domain-containing protein.	0.640
A0A2K3CN14	A0A2K3CWV1	A0A2K3CN14	A0A2K3CWV1	Uncharacterized protein.	RanBD1 domain-containing protein.	0.488
A0A2K3CN14	A0A2K3DD98	A0A2K3CN14	A0A2K3DD98	Uncharacterized protein.	RanBD1 domain-containing protein.	0.488
A0A2K3CN14	A0A2K3DEU8	A0A2K3CN14	A0A2K3DEU8	Uncharacterized protein.	GRIP domain-containing protein.	0.488
A0A2K3CN14	A0A2K3E7Z1	A0A2K3CN14	A0A2K3E7Z1	Uncharacterized protein.	Uncharacterized protein.	0.478
A0A2K3CN14	IPB1	A0A2K3CN14	A0A2K3E702	Uncharacterized protein.	Importin N-terminal domain-containing protein.	0.817
A0A2K3CN14	RAN1	A0A2K3CN14	A8IRX5	Uncharacterized protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.558
A0A2K3CQ27	A0A2K3CT54	A0A2K3CQ27	A0A2K3CT54	Nuclear pore protein.	Uncharacterized protein.	0.943
A0A2K3CQ27	A0A2K3CTE7	A0A2K3CQ27	A0A2K3CTE7	Nuclear pore protein.	ANK_REP_REGION domain-containing protein.	0.922
A0A2K3CQ27	A0A2K3CTV5	A0A2K3CQ27	A0A2K3CTV5	Nuclear pore protein.	Uncharacterized protein.	0.566
A0A2K3CQ27	A0A2K3CU41	A0A2K3CQ27	A0A2K3CU41	Nuclear pore protein.	Uncharacterized protein.	0.913
A0A2K3CQ27	A0A2K3CU60	A0A2K3CQ27	A0A2K3CU60	Nuclear pore protein.	Uncharacterized protein.	0.923
A0A2K3CQ27	A0A2K3CUA8	A0A2K3CQ27	A0A2K3CUA8	Nuclear pore protein.	Uncharacterized protein.	0.952
A0A2K3CQ27	A0A2K3CVH4	A0A2K3CQ27	A0A2K3CVH4	Nuclear pore protein.	Uncharacterized protein.	0.713
A0A2K3CQ27	A0A2K3CW45	A0A2K3CQ27	A0A2K3CW45	Nuclear pore protein.	PPIase cyclophilin-type domain-containing protein.	0.531
A0A2K3CQ27	A0A2K3CWV1	A0A2K3CQ27	A0A2K3CWV1	Nuclear pore protein.	RanBD1 domain-containing protein.	0.914
A0A2K3CQ27	A0A2K3D060	A0A2K3CQ27	A0A2K3D060	Nuclear pore protein.	Uncharacterized protein.	0.999
A0A2K3CQ27	A0A2K3D0V4	A0A2K3CQ27	A0A2K3D0V4	Nuclear pore protein.	Uncharacterized protein.	0.948
A0A2K3CQ27	A0A2K3D0V6	A0A2K3CQ27	A0A2K3D0V6	Nuclear pore protein.	Uncharacterized protein.	0.948

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