(29 nodes) Proteasome, and Proteasomal ATPase OB C-terminal domain network (Chlamydomonas reinhardtii)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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co-expression

protein homology

Your Input:
	A0A2K3CN11	Uncharacterized protein. (246 aa)
	RPN12	PCI domain-containing protein. (265 aa)
	RPN2	26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (1034 aa)
	RPN10	VWFA domain-containing protein. (386 aa)
	RPN1	26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (900 aa)
	A0A2K3CYU3	PCI domain-containing protein. (494 aa)
	A0A2K3D0E5	PCI domain-containing protein. (385 aa)
	A0A2K3D880	RPN13_C domain-containing protein. (369 aa)
	A0A2K3DCQ1	AAA domain-containing protein; Belongs to the AAA ATPase family. (414 aa)
	A0A2K3DN31	Uncharacterized protein. (170 aa)
	POA6	Proteasome endopeptidase complex. (255 aa)
	A0A2K3DTA6	AAA domain-containing protein; Belongs to the AAA ATPase family. (396 aa)
	POA7	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (249 aa)
	POA4	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (254 aa)
	RPN3	26S proteasome regulatory subunit. (488 aa)
	PBE1	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (273 aa)
	RPN6	26S proteasome regulatory subunit. (421 aa)
	PBB1	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (270 aa)
	POA3	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (253 aa)
	RPT2	26S proteasome regulatory subunit; Belongs to the AAA ATPase family. (443 aa)
	RPT5	26S proteasome regulatory subunit; Belongs to the AAA ATPase family. (428 aa)
	POA1	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (249 aa)
	RPT1	26S proteasome regulatory subunit; Belongs to the AAA ATPase family. (427 aa)
	RPN9	26S proteasome regulatory subunit. (402 aa)
	PBG1	Proteasome subunit beta; Belongs to the peptidase T1B family. (285 aa)
	POA5	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (241 aa)
	RPN8	26S proteasome regulatory subunit. (330 aa)
	PBD1	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (193 aa)
	POA2	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (235 aa)

Your Current Organism:

Chlamydomonas reinhardtii

NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K3CN11	A0A2K3CYU3	A0A2K3CN11	A0A2K3CYU3	Uncharacterized protein.	PCI domain-containing protein.	0.999
A0A2K3CN11	A0A2K3D0E5	A0A2K3CN11	A0A2K3D0E5	Uncharacterized protein.	PCI domain-containing protein.	0.999
A0A2K3CN11	A0A2K3D880	A0A2K3CN11	A0A2K3D880	Uncharacterized protein.	RPN13_C domain-containing protein.	0.969
A0A2K3CN11	A0A2K3DCQ1	A0A2K3CN11	A0A2K3DCQ1	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.990
A0A2K3CN11	A0A2K3DN31	A0A2K3CN11	A0A2K3DN31	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A2K3CN11	A0A2K3DTA6	A0A2K3CN11	A0A2K3DTA6	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.992
A0A2K3CN11	PBB1	A0A2K3CN11	A8ICB3	Uncharacterized protein.	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	0.999
A0A2K3CN11	PBD1	A0A2K3CN11	A8JAI8	Uncharacterized protein.	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	0.999
A0A2K3CN11	PBE1	A0A2K3CN11	A8I1A7	Uncharacterized protein.	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	0.998
A0A2K3CN11	PBG1	A0A2K3CN11	A8J212	Uncharacterized protein.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.999
A0A2K3CN11	POA1	A0A2K3CN11	A8IRE2	Uncharacterized protein.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.999
A0A2K3CN11	POA2	A0A2K3CN11	A8JEW4	Uncharacterized protein.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.999
A0A2K3CN11	POA3	A0A2K3CN11	A8ID63	Uncharacterized protein.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.999
A0A2K3CN11	POA4	A0A2K3CN11	A8HQI6	Uncharacterized protein.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.999
A0A2K3CN11	POA5	A0A2K3CN11	A8J6K9	Uncharacterized protein.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.999
A0A2K3CN11	POA6	A0A2K3CN11	A0A2K3DR83	Uncharacterized protein.	Proteasome endopeptidase complex.	0.999
A0A2K3CN11	POA7	A0A2K3CN11	A8HP17	Uncharacterized protein.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.999
A0A2K3CN11	RPN1	A0A2K3CN11	A0A2K3CVU3	Uncharacterized protein.	26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
A0A2K3CN11	RPN10	A0A2K3CN11	A0A2K3CTP8	Uncharacterized protein.	VWFA domain-containing protein.	0.994
A0A2K3CN11	RPN12	A0A2K3CN11	A0A2K3CPH2	Uncharacterized protein.	PCI domain-containing protein.	0.993

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