(18 nodes) Microbody membrane network (Chlamydomonas reinhardtii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2K3CV78	Uncharacterized protein. (1878 aa)
	A0A2K3CWD7	Uncharacterized protein. (157 aa)
	A0A2K3CWL4	ABC transporter domain-containing protein. (786 aa)
	A0A2K3CXS4	Uncharacterized protein. (660 aa)
	A0A2K3D266	ACB domain-containing protein. (246 aa)
	A0A2K3D6X8	Uncharacterized protein. (237 aa)
	A0A2K3D7Y2	Uncharacterized protein. (672 aa)
	A0A2K3D8F2	Uncharacterized protein. (584 aa)
	A0A2K3DAD7	Uncharacterized protein. (783 aa)
	A0A2K3DAV4	Uncharacterized protein. (1371 aa)
	A0A2K3DBE1	Pex14_N domain-containing protein. (895 aa)
	A0A2K3DK94	RING-type domain-containing protein. (632 aa)
	A0A2K3DMT5	Uncharacterized protein. (234 aa)
	A0A2K3DMU2	Pex2_Pex12 domain-containing protein. (402 aa)
	A0A2K3E1H9	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (429 aa)
	PEX19	Uncharacterized protein. (529 aa)
	PEX5	Peroxisomal targeting signal 1 receptor. (846 aa)
	PEX7	Peroxisomal targeting signal 2 receptor. (319 aa)

Your Current Organism:

Chlamydomonas reinhardtii

NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K3CV78	A0A2K3CWD7	A0A2K3CV78	A0A2K3CWD7	Uncharacterized protein.	Uncharacterized protein.	0.558
A0A2K3CV78	A0A2K3CXS4	A0A2K3CV78	A0A2K3CXS4	Uncharacterized protein.	Uncharacterized protein.	0.769
A0A2K3CV78	A0A2K3D6X8	A0A2K3CV78	A0A2K3D6X8	Uncharacterized protein.	Uncharacterized protein.	0.598
A0A2K3CV78	A0A2K3D7Y2	A0A2K3CV78	A0A2K3D7Y2	Uncharacterized protein.	Uncharacterized protein.	0.682
A0A2K3CV78	A0A2K3D8F2	A0A2K3CV78	A0A2K3D8F2	Uncharacterized protein.	Uncharacterized protein.	0.826
A0A2K3CV78	A0A2K3DAV4	A0A2K3CV78	A0A2K3DAV4	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A2K3CV78	A0A2K3DBE1	A0A2K3CV78	A0A2K3DBE1	Uncharacterized protein.	Pex14_N domain-containing protein.	0.826
A0A2K3CV78	A0A2K3DK94	A0A2K3CV78	A0A2K3DK94	Uncharacterized protein.	RING-type domain-containing protein.	0.906
A0A2K3CV78	A0A2K3DMT5	A0A2K3CV78	A0A2K3DMT5	Uncharacterized protein.	Uncharacterized protein.	0.598
A0A2K3CV78	A0A2K3DMU2	A0A2K3CV78	A0A2K3DMU2	Uncharacterized protein.	Pex2_Pex12 domain-containing protein.	0.924
A0A2K3CV78	PEX19	A0A2K3CV78	A0A2K3E3I7	Uncharacterized protein.	Uncharacterized protein.	0.816
A0A2K3CV78	PEX5	A0A2K3CV78	A8HNS4	Uncharacterized protein.	Peroxisomal targeting signal 1 receptor.	0.932
A0A2K3CV78	PEX7	A0A2K3CV78	A8JFH6	Uncharacterized protein.	Peroxisomal targeting signal 2 receptor.	0.864
A0A2K3CWD7	A0A2K3CV78	A0A2K3CWD7	A0A2K3CV78	Uncharacterized protein.	Uncharacterized protein.	0.558
A0A2K3CWD7	A0A2K3CWL4	A0A2K3CWD7	A0A2K3CWL4	Uncharacterized protein.	ABC transporter domain-containing protein.	0.819
A0A2K3CWD7	A0A2K3CXS4	A0A2K3CWD7	A0A2K3CXS4	Uncharacterized protein.	Uncharacterized protein.	0.986
A0A2K3CWD7	A0A2K3D266	A0A2K3CWD7	A0A2K3D266	Uncharacterized protein.	ACB domain-containing protein.	0.561
A0A2K3CWD7	A0A2K3D6X8	A0A2K3CWD7	A0A2K3D6X8	Uncharacterized protein.	Uncharacterized protein.	0.824
A0A2K3CWD7	A0A2K3D7Y2	A0A2K3CWD7	A0A2K3D7Y2	Uncharacterized protein.	Uncharacterized protein.	0.826
A0A2K3CWD7	A0A2K3D8F2	A0A2K3CWD7	A0A2K3D8F2	Uncharacterized protein.	Uncharacterized protein.	0.753

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