STRINGSTRING
rps4 rps4 Rap38 Rap38 A0A2K3D5T2 A0A2K3D5T2 MED10 MED10 A0A2K3D3E8 A0A2K3D3E8 A0A2K3D6D3 A0A2K3D6D3 A0A2K3D701 A0A2K3D701 A0A2K3D737 A0A2K3D737 A0A2K3D7B6 A0A2K3D7B6 A0A2K3D369 A0A2K3D369 A0A2K3D2M0 A0A2K3D2M0 A0A2K3D2A7 A0A2K3D2A7 A0A2K3D224 A0A2K3D224 A0A2K3D0S8 A0A2K3D0S8 A0A2K3D082 A0A2K3D082 A0A2K3CYL1 A0A2K3CYL1 A0A2K3CXF4 A0A2K3CXF4 A0A2K3CVM5 A0A2K3CVM5 A0A2K3CV22 A0A2K3CV22 A0A2K3CV18 A0A2K3CV18 A0A2K3CTH3 A0A2K3CTH3 A0A2K3CTH2 A0A2K3CTH2 A0A2K3CSP5 A0A2K3CSP5 A0A2K3CSI8 A0A2K3CSI8 A0A2K3CSF6 A0A2K3CSF6 A0A2K3CSE8 A0A2K3CSE8 A0A2K3CSD5 A0A2K3CSD5 A0A2K3CSC5 A0A2K3CSC5 A0A2K3CRG5 A0A2K3CRG5 A0A2K3CQN4 A0A2K3CQN4 A0A2K3CPA3 A0A2K3CPA3 HAP3 HAP3 A0A2K3D2T6 A0A2K3D2T6 A0A2K3D7D2 A0A2K3D7D2 MED6 MED6 A0A2K3D8E3 A0A2K3D8E3 A0A2K3D920 A0A2K3D920 A0A2K3D925 A0A2K3D925 A0A2K3DAJ6 A0A2K3DAJ6 CYCM1 CYCM1 A0A2K3DD00 A0A2K3DD00 A0A2K3DDB9 A0A2K3DDB9 A0A2K3DER7 A0A2K3DER7 A0A2K3DEZ8 A0A2K3DEZ8 A0A2K3DF01 A0A2K3DF01 A0A2K3DF59 A0A2K3DF59 A0A2K3DGV4 A0A2K3DGV4 A0A2K3DH92 A0A2K3DH92 A0A2K3DI74 A0A2K3DI74 A0A2K3DI91 A0A2K3DI91 CDKC1 CDKC1 A0A2K3DII3 A0A2K3DII3 A0A2K3DIN8 A0A2K3DIN8 A0A2K3DIZ0 A0A2K3DIZ0 A0A2K3DJD3 A0A2K3DJD3 A0A2K3DJH5 A0A2K3DJH5 SPLH1 SPLH1 A0A2K3DJQ8 A0A2K3DJQ8 A0A2K3DK49 A0A2K3DK49 A0A2K3DKW1 A0A2K3DKW1 A0A2K3DL83 A0A2K3DL83 A0A2K3DLK7 A0A2K3DLK7 A0A2K3DMH1 A0A2K3DMH1 A0A2K3DP34 A0A2K3DP34 A0A2K3DPJ6 A0A2K3DPJ6 A0A2K3DPR6 A0A2K3DPR6 A0A2K3DPT9 A0A2K3DPT9 A0A2K3DQ55 A0A2K3DQ55 A0A2K3DQ88 A0A2K3DQ88 A0A2K3DQD3 A0A2K3DQD3 A0A2K3DR90 A0A2K3DR90 A0A2K3DRN7 A0A2K3DRN7 A0A2K3DRR7 A0A2K3DRR7 A0A2K3DRT5 A0A2K3DRT5 A0A2K3DSY5 A0A2K3DSY5 A0A2K3DTP8 A0A2K3DTP8 A0A2K3DTS3 A0A2K3DTS3 A0A2K3DUB1 A0A2K3DUB1 A0A2K3DUI4 A0A2K3DUI4 A0A2K3DV20 A0A2K3DV20 A0A2K3DV51 A0A2K3DV51 A0A2K3DVX6 A0A2K3DVX6 A0A2K3DWC9 A0A2K3DWC9 A0A2K3DWI1 A0A2K3DWI1 A0A2K3DWN1 A0A2K3DWN1 A0A2K3DWY6 A0A2K3DWY6 A0A2K3DX70 A0A2K3DX70 LPA2 LPA2 A0A2K3DXA0 A0A2K3DXA0 CYCC1 CYCC1 A0A2K3DXE2 A0A2K3DXE2 A0A2K3DXG5 A0A2K3DXG5 A0A2K3DY39 A0A2K3DY39 A0A2K3DY83 A0A2K3DY83 A0A2K3DYA0 A0A2K3DYA0 A0A2K3DYA7 A0A2K3DYA7 A0A2K3DYN2 A0A2K3DYN2 A0A2K3DYN4 A0A2K3DYN4 A0A2K3DYQ4 A0A2K3DYQ4 A0A2K3DZW9 A0A2K3DZW9 A0A2K3E001 A0A2K3E001 A0A2K3E115 A0A2K3E115 A0A2K3E143 A0A2K3E143 A0A2K3E2J1 A0A2K3E2J1 A0A2K3E5G4 A0A2K3E5G4 A0A2K3E5K1 A0A2K3E5K1 A0A2K3E5Y3 A0A2K3E5Y3 A0A2K3E6H8 A0A2K3E6H8 A0A2K3E754 A0A2K3E754 A0A2K3E7C0 A0A2K3E7C0 E2F1 E2F1 A8HY46_CHLRE A8HY46_CHLRE EIF2G EIF2G EIF5A EIF5A A8I2N9_CHLRE A8I2N9_CHLRE A8I3E4_CHLRE A8I3E4_CHLRE FAP280 FAP280 FAP174 FAP174 CPLD47 CPLD47 CSP41a CSP41a RPT4 RPT4 A8IRS9_CHLRE A8IRS9_CHLRE RPB7A RPB7A CDKD1 CDKD1 HCP1 HCP1 HCP4 HCP4 HCP3 HCP3 HCP2 HCP2 A8J0C9_CHLRE A8J0C9_CHLRE A8J242_CHLRE A8J242_CHLRE A8J996_CHLRE A8J996_CHLRE EIF3H EIF3H CPL7 CPL7 A8JDB0_CHLRE A8JDB0_CHLRE A8JER6_CHLRE A8JER6_CHLRE A8JFR8_CHLRE A8JFR8_CHLRE RPS9 RPS9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rps430S ribosomal protein S4, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. Belongs to the universal ribosomal protein uS4 family. (257 aa)
Rap38Chloroplast stem-loop-binding protein. (401 aa)
A0A2K3D5T2CBFD_NFYB_HMF domain-containing protein. (296 aa)
MED10Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (156 aa)
A0A2K3D3E8Uncharacterized protein. (2075 aa)
A0A2K3D6D3BP28CT domain-containing protein. (2536 aa)
A0A2K3D701Uncharacterized protein. (1085 aa)
A0A2K3D737DUF3707 domain-containing protein. (516 aa)
A0A2K3D7B6MADS-box domain-containing protein. (895 aa)
A0A2K3D369BZIP domain-containing protein. (902 aa)
A0A2K3D2M0Uncharacterized protein. (634 aa)
A0A2K3D2A7Smg4_UPF3 domain-containing protein. (612 aa)
A0A2K3D224Uncharacterized protein. (700 aa)
A0A2K3D0S8Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (450 aa)
A0A2K3D082Uncharacterized protein. (1001 aa)
A0A2K3CYL1Uncharacterized protein. (230 aa)
A0A2K3CXF4CYCLIN domain-containing protein; Belongs to the cyclin family. (384 aa)
A0A2K3CVM5Uncharacterized protein. (1543 aa)
A0A2K3CV22Uncharacterized protein. (463 aa)
A0A2K3CV18Uncharacterized protein. (73 aa)
A0A2K3CTH3Uncharacterized protein. (483 aa)
A0A2K3CTH2Uncharacterized protein. (358 aa)
A0A2K3CSP5Uncharacterized protein. (665 aa)
A0A2K3CSI8Uncharacterized protein. (638 aa)
A0A2K3CSF6Uncharacterized protein. (631 aa)
A0A2K3CSE8Uncharacterized protein. (725 aa)
A0A2K3CSD5Uncharacterized protein. (495 aa)
A0A2K3CSC5Uncharacterized protein. (632 aa)
A0A2K3CRG5Uncharacterized protein. (1186 aa)
A0A2K3CQN4AAA domain-containing protein. (743 aa)
A0A2K3CPA3Uncharacterized protein. (858 aa)
HAP3CCAAT-box binding factor HAP3-like protein. (209 aa)
A0A2K3D2T6ARID domain-containing protein. (1663 aa)
A0A2K3D7D2Uncharacterized protein. (225 aa)
MED6Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (371 aa)
A0A2K3D8E3Uncharacterized protein. (237 aa)
A0A2K3D920Uncharacterized protein. (1514 aa)
A0A2K3D925Uncharacterized protein. (1524 aa)
A0A2K3DAJ6Uncharacterized protein. (1066 aa)
CYCM1Cyclin N-terminal domain-containing protein. (534 aa)
A0A2K3DD00Uncharacterized protein. (1116 aa)
A0A2K3DDB9FAS1 domain-containing protein. (1520 aa)
A0A2K3DER7Uncharacterized protein. (3537 aa)
A0A2K3DEZ8Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2691 aa)
A0A2K3DF01TMF_TATA_bd domain-containing protein. (784 aa)
A0A2K3DF59S1 motif domain-containing protein. (1794 aa)
A0A2K3DGV4Uncharacterized protein. (587 aa)
A0A2K3DH92Uncharacterized protein. (554 aa)
A0A2K3DI74AB hydrolase-1 domain-containing protein. (272 aa)
A0A2K3DI91Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (898 aa)
CDKC1Protein kinase domain-containing protein. (549 aa)
A0A2K3DII3RPOL4c domain-containing protein. (140 aa)
A0A2K3DIN8Uncharacterized protein. (937 aa)
A0A2K3DIZ0GATA-type domain-containing protein. (442 aa)
A0A2K3DJD3Uncharacterized protein. (456 aa)
A0A2K3DJH5Uncharacterized protein. (1004 aa)
SPLH1OB_NTP_bind domain-containing protein. (76 aa)
A0A2K3DJQ8Uncharacterized protein. (774 aa)
A0A2K3DK49Uncharacterized protein. (1126 aa)
A0A2K3DKW1N-acetyltransferase domain-containing protein. (469 aa)
A0A2K3DL83TAF domain-containing protein. (796 aa)
A0A2K3DLK7Uncharacterized protein. (2034 aa)
A0A2K3DMH1PHD-type domain-containing protein. (2180 aa)
A0A2K3DP34Uncharacterized protein. (1406 aa)
A0A2K3DPJ6Uncharacterized protein. (1607 aa)
A0A2K3DPR6Uncharacterized protein. (753 aa)
A0A2K3DPT9EF-hand domain-containing protein. (1989 aa)
A0A2K3DQ55Uncharacterized protein. (640 aa)
A0A2K3DQ88Uncharacterized protein. (2757 aa)
A0A2K3DQD3Uncharacterized protein. (1426 aa)
A0A2K3DR90Uncharacterized protein. (1095 aa)
A0A2K3DRN7BZIP domain-containing protein. (528 aa)
A0A2K3DRR7Uncharacterized protein. (1176 aa)
A0A2K3DRT5Protein kinase domain-containing protein. (1704 aa)
A0A2K3DSY5BACK domain-containing protein. (608 aa)
A0A2K3DTP8Uncharacterized protein. (1851 aa)
A0A2K3DTS3Uncharacterized protein. (909 aa)
A0A2K3DUB1Uncharacterized protein. (1924 aa)
A0A2K3DUI4BHLH domain-containing protein. (760 aa)
A0A2K3DV20Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (529 aa)
A0A2K3DV51Uncharacterized protein. (1039 aa)
A0A2K3DVX6EAF domain-containing protein. (476 aa)
A0A2K3DWC9GATA-type domain-containing protein. (787 aa)
A0A2K3DWI1Uncharacterized protein. (3832 aa)
A0A2K3DWN1Translation factor GUF1 homolog, chloroplastic; Promotes chloroplast protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. (624 aa)
A0A2K3DWY6Uncharacterized protein. (811 aa)
A0A2K3DX70Uncharacterized protein. (1082 aa)
LPA2Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (938 aa)
A0A2K3DXA0Uncharacterized protein. (2449 aa)
CYCC1Uncharacterized protein; Belongs to the cyclin family. (268 aa)
A0A2K3DXE2DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (547 aa)
A0A2K3DXG5JmjC domain-containing protein. (840 aa)
A0A2K3DY39TMF_TATA_bd domain-containing protein. (1158 aa)
A0A2K3DY83Uncharacterized protein. (1285 aa)
A0A2K3DYA0Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1826 aa)
A0A2K3DYA7Uncharacterized protein. (1511 aa)
A0A2K3DYN2Uncharacterized protein. (216 aa)
A0A2K3DYN4Plus3 domain-containing protein. (642 aa)
A0A2K3DYQ4WD_REPEATS_REGION domain-containing protein. (524 aa)
A0A2K3DZW9TAZ-type domain-containing protein. (771 aa)
A0A2K3E001TAZ-type domain-containing protein. (793 aa)
A0A2K3E115Uncharacterized protein. (549 aa)
A0A2K3E143Uncharacterized protein. (802 aa)
A0A2K3E2J1Uncharacterized protein. (484 aa)
A0A2K3E5G4TAFII28 domain-containing protein. (235 aa)
A0A2K3E5K1Uncharacterized protein. (814 aa)
A0A2K3E5Y3PHD-type domain-containing protein. (2891 aa)
A0A2K3E6H8GATA-type domain-containing protein. (744 aa)
A0A2K3E754Uncharacterized protein. (740 aa)
A0A2K3E7C0Bromo domain-containing protein. (1762 aa)
E2F1E2F_TDP domain-containing protein. (513 aa)
A8HY46_CHLREHistone acetyltransferase. (517 aa)
EIF2GEukaryotic initiation factor. (462 aa)
EIF5AEukaryotic translation initiation factor 5A. (165 aa)
A8I2N9_CHLRETranscription initiation factor. (122 aa)
A8I3E4_CHLREPredicted protein. (214 aa)
FAP280Flagellar associated protein, transcriptional coactivator-like protein. (139 aa)
FAP174Flagellar associated protein 174. (93 aa)
CPLD47Predicted membrane protein. (147 aa)
CSP41aChloroplast stem-loop-binding protein. (439 aa)
RPT426S proteasome regulatory subunit; Belongs to the AAA ATPase family. (399 aa)
A8IRS9_CHLREPredicted protein. (240 aa)
RPB7ADNA-directed RNA polymerase II, 19 kDa polypeptide. (176 aa)
CDKD1CDK activating kinase; Belongs to the protein kinase superfamily. (353 aa)
HCP1Hybrid-cluster protein. (644 aa)
HCP4Hybrid-cluster protein. (646 aa)
HCP3Hybrid-cluster protein. (649 aa)
HCP2Hybrid-cluster protein. (654 aa)
A8J0C9_CHLREPredicted protein. (168 aa)
A8J242_CHLREPredicted protein. (832 aa)
A8J996_CHLREPredicted protein. (297 aa)
EIF3HEukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (330 aa)
CPL7GIF3-like protein. (183 aa)
A8JDB0_CHLREPredicted protein. (181 aa)
A8JER6_CHLRETranscription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (104 aa)
A8JFR8_CHLREPredicted protein. (142 aa)
RPS9Ribosomal protein S9, component of cytosolic 80S ribosome and 40S small subunit; Belongs to the universal ribosomal protein uS4 family. (190 aa)
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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