(12 nodes) Transcription preinitiation complex assembly network (Chlamydomonas reinhardtii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Others

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Your Input:
	A0A2K3D4R7	TFIID_20kDa domain-containing protein. (403 aa)
	A0A2K3D5Q7	Uncharacterized protein. (1496 aa)
	A0A2K3D9G8	Uncharacterized protein. (2560 aa)
	A0A2K3DIN8	Uncharacterized protein. (937 aa)
	A0A2K3DL83	TAF domain-containing protein. (796 aa)
	A0A2K3DME7	Uncharacterized protein. (939 aa)
	A0A2K3DRL9	TFIIB-type domain-containing protein. (448 aa)
	A0A2K3E5E8	TAFII55_N domain-containing protein. (210 aa)
	A0A2K3E5G4	TAFII28 domain-containing protein. (235 aa)
	A0A2K3E8L0	Uncharacterized protein. (487 aa)
	A8JFR8_CHLRE	Predicted protein. (142 aa)
	A0A2K3CWE3	Myb_DNA-bind_7 domain-containing protein. (2017 aa)

Your Current Organism:

Chlamydomonas reinhardtii

NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K3CWE3	A0A2K3DME7	A0A2K3CWE3	A0A2K3DME7	Myb_DNA-bind_7 domain-containing protein.	Uncharacterized protein.	0.999
A0A2K3CWE3	A0A2K3DRL9	A0A2K3CWE3	A0A2K3DRL9	Myb_DNA-bind_7 domain-containing protein.	TFIIB-type domain-containing protein.	0.507
A0A2K3D4R7	A0A2K3D5Q7	A0A2K3D4R7	A0A2K3D5Q7	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.987
A0A2K3D4R7	A0A2K3D9G8	A0A2K3D4R7	A0A2K3D9G8	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.999
A0A2K3D4R7	A0A2K3DIN8	A0A2K3D4R7	A0A2K3DIN8	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.999
A0A2K3D4R7	A0A2K3DL83	A0A2K3D4R7	A0A2K3DL83	TFIID_20kDa domain-containing protein.	TAF domain-containing protein.	0.999
A0A2K3D4R7	A0A2K3DRL9	A0A2K3D4R7	A0A2K3DRL9	TFIID_20kDa domain-containing protein.	TFIIB-type domain-containing protein.	0.994
A0A2K3D4R7	A0A2K3E5E8	A0A2K3D4R7	A0A2K3E5E8	TFIID_20kDa domain-containing protein.	TAFII55_N domain-containing protein.	0.999
A0A2K3D4R7	A0A2K3E5G4	A0A2K3D4R7	A0A2K3E5G4	TFIID_20kDa domain-containing protein.	TAFII28 domain-containing protein.	0.999
A0A2K3D4R7	A8JFR8_CHLRE	A0A2K3D4R7	A8JFR8	TFIID_20kDa domain-containing protein.	Predicted protein.	0.999
A0A2K3D5Q7	A0A2K3D4R7	A0A2K3D5Q7	A0A2K3D4R7	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.987
A0A2K3D5Q7	A0A2K3DIN8	A0A2K3D5Q7	A0A2K3DIN8	Uncharacterized protein.	Uncharacterized protein.	0.665
A0A2K3D5Q7	A0A2K3DL83	A0A2K3D5Q7	A0A2K3DL83	Uncharacterized protein.	TAF domain-containing protein.	0.960
A0A2K3D5Q7	A8JFR8_CHLRE	A0A2K3D5Q7	A8JFR8	Uncharacterized protein.	Predicted protein.	0.988
A0A2K3D9G8	A0A2K3D4R7	A0A2K3D9G8	A0A2K3D4R7	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.999
A0A2K3D9G8	A0A2K3DIN8	A0A2K3D9G8	A0A2K3DIN8	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A2K3D9G8	A0A2K3DL83	A0A2K3D9G8	A0A2K3DL83	Uncharacterized protein.	TAF domain-containing protein.	0.999
A0A2K3D9G8	A0A2K3DRL9	A0A2K3D9G8	A0A2K3DRL9	Uncharacterized protein.	TFIIB-type domain-containing protein.	0.996
A0A2K3D9G8	A0A2K3E5E8	A0A2K3D9G8	A0A2K3E5E8	Uncharacterized protein.	TAFII55_N domain-containing protein.	0.999
A0A2K3D9G8	A0A2K3E5G4	A0A2K3D9G8	A0A2K3E5G4	Uncharacterized protein.	TAFII28 domain-containing protein.	0.999

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