(48 nodes) Histone-fold network (Chlamydomonas reinhardtii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2K3DYI1	HMG box domain-containing protein. (231 aa)
	HAP3	CCAAT-box binding factor HAP3-like protein. (209 aa)
	DRT1	CBFD_NFYB_HMF domain-containing protein. (189 aa)
	DRT2	CBFD_NFYB_HMF domain-containing protein. (649 aa)
	A0A2K3D4R7	TFIID_20kDa domain-containing protein. (403 aa)
	A0A2K3D5T2	CBFD_NFYB_HMF domain-containing protein. (296 aa)
	A0A2K3DKK9	CBFD_NFYB_HMF domain-containing protein. (278 aa)
	A0A2K3DL83	TAF domain-containing protein. (796 aa)
	A0A2K3DMY7	Histone domain-containing protein. (192 aa)
	A0A2K3DNE9	Histone H2B; Belongs to the histone H2B family. (137 aa)
	A0A2K3DNT1	Histone H2A; Belongs to the histone H2A family. (100 aa)
	A0A2K3DQQ5	BTP domain-containing protein. (415 aa)
	HAV2	Uncharacterized protein; Belongs to the histone H2A family. (4903 aa)
	A0A2K3DUB0	Uncharacterized protein. (271 aa)
	A0A2K3DUP2	Uncharacterized protein. (409 aa)
	HTV2	Histone domain-containing protein. (202 aa)
	HTV1	Histone domain-containing protein. (232 aa)
	A0A2K3E5G4	TAFII28 domain-containing protein. (235 aa)
	A8HRZ9_CHLRE	Histone H2A; Belongs to the histone H2A family. (144 aa)
	HTR2	Histone H3; Belongs to the histone H3 family. (135 aa)
	HFO2	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	HTB2	Histone H2B; Belongs to the histone H2B family. (156 aa)
	HTA2	Histone H2A; Belongs to the histone H2A family. (129 aa)
	HTB4	Histone H2B; Belongs to the histone H2B family. (153 aa)
	HFO4	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	HTB9	Histone H2B; Belongs to the histone H2B family. (153 aa)
	HTA10	Histone H2A; Belongs to the histone H2A family. (132 aa)
	HTA11	Histone H2A; Belongs to the histone H2A family. (132 aa)
	HTB13	Histone H2B; Belongs to the histone H2B family. (153 aa)
	HTB14	Histone H2B; Belongs to the histone H2B family. (153 aa)
	HTB15	Histone H2B; Belongs to the histone H2B family. (152 aa)
	HTB16	Histone H2B; Belongs to the histone H2B family. (153 aa)
	HTB30	Histone H2B; Belongs to the histone H2B family. (153 aa)
	HTB20	Histone H2B; Belongs to the histone H2B family. (153 aa)
	HTA20	Histone H2A; Belongs to the histone H2A family. (129 aa)
	HTB37	Histone H2B; Belongs to the histone H2B family. (155 aa)
	HTB38	Histone H2B; Belongs to the histone H2B family. (155 aa)
	HTV3	Histone H3 variant. (156 aa)
	HFO41	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	HTR41	Histone H3; Belongs to the histone H3 family. (135 aa)
	HBV1	Histone H2B; Belongs to the histone H2B family. (121 aa)
	HTB1	Histone H2B; Belongs to the histone H2B family. (153 aa)
	HTB21	Histone H2B; Belongs to the histone H2B family. (153 aa)
	HTB22	Histone H2B; Belongs to the histone H2B family. (153 aa)
	HTB5	Histone H2B; Belongs to the histone H2B family. (153 aa)
	A8JFR8_CHLRE	Predicted protein. (142 aa)
	HTB23	Histone H2B; Belongs to the histone H2B family. (153 aa)
	ch2a-IV	Histone H2A; Belongs to the histone H2A family. (130 aa)

Your Current Organism:

Chlamydomonas reinhardtii

NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K3D4R7	A0A2K3DL83	A0A2K3D4R7	A0A2K3DL83	TFIID_20kDa domain-containing protein.	TAF domain-containing protein.	0.999
A0A2K3D4R7	A0A2K3DQQ5	A0A2K3D4R7	A0A2K3DQQ5	TFIID_20kDa domain-containing protein.	BTP domain-containing protein.	0.988
A0A2K3D4R7	A0A2K3DUB0	A0A2K3D4R7	A0A2K3DUB0	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.999
A0A2K3D4R7	A0A2K3E5G4	A0A2K3D4R7	A0A2K3E5G4	TFIID_20kDa domain-containing protein.	TAFII28 domain-containing protein.	0.999
A0A2K3D4R7	A8JFR8_CHLRE	A0A2K3D4R7	A8JFR8	TFIID_20kDa domain-containing protein.	Predicted protein.	0.999
A0A2K3D5T2	A0A2K3DKK9	A0A2K3D5T2	A0A2K3DKK9	CBFD_NFYB_HMF domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.857
A0A2K3D5T2	HAP3	A0A2K3D5T2	A0A0I9QPW6	CBFD_NFYB_HMF domain-containing protein.	CCAAT-box binding factor HAP3-like protein.	0.943
A0A2K3DKK9	A0A2K3D5T2	A0A2K3DKK9	A0A2K3D5T2	CBFD_NFYB_HMF domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.857
A0A2K3DKK9	A0A2K3DUP2	A0A2K3DKK9	A0A2K3DUP2	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.857
A0A2K3DKK9	A0A2K3DYI1	A0A2K3DKK9	A0A2K3DYI1	CBFD_NFYB_HMF domain-containing protein.	HMG box domain-containing protein.	0.857
A0A2K3DKK9	DRT1	A0A2K3DKK9	A0A2K3CRM2	CBFD_NFYB_HMF domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.863
A0A2K3DL83	A0A2K3D4R7	A0A2K3DL83	A0A2K3D4R7	TAF domain-containing protein.	TFIID_20kDa domain-containing protein.	0.999
A0A2K3DL83	A0A2K3DQQ5	A0A2K3DL83	A0A2K3DQQ5	TAF domain-containing protein.	BTP domain-containing protein.	0.999
A0A2K3DL83	A0A2K3DUB0	A0A2K3DL83	A0A2K3DUB0	TAF domain-containing protein.	Uncharacterized protein.	0.999
A0A2K3DL83	A0A2K3E5G4	A0A2K3DL83	A0A2K3E5G4	TAF domain-containing protein.	TAFII28 domain-containing protein.	0.999
A0A2K3DL83	A8JFR8_CHLRE	A0A2K3DL83	A8JFR8	TAF domain-containing protein.	Predicted protein.	0.999
A0A2K3DMY7	A0A2K3DNE9	A0A2K3DMY7	A0A2K3DNE9	Histone domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.641
A0A2K3DMY7	A0A2K3DNT1	A0A2K3DMY7	A0A2K3DNT1	Histone domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.533
A0A2K3DMY7	A8HRZ9_CHLRE	A0A2K3DMY7	A8HRZ9	Histone domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.746
A0A2K3DMY7	HAV2	A0A2K3DMY7	A0A2K3DSI6	Histone domain-containing protein.	Uncharacterized protein; Belongs to the histone H2A family.	0.746

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