(97 nodes) Tetratricopeptide repeat network (Chlamydomonas reinhardtii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BBS4	Bardet biedl syndrome 4 protein. (407 aa)
	A0A2K3D1F9	Uncharacterized protein. (1018 aa)
	A0A2K3D0B1	TPR_REGION domain-containing protein. (306 aa)
	A0A2K3CZ15	TPR_REGION domain-containing protein. (905 aa)
	A0A2K3CYX5	Uncharacterized protein. (948 aa)
	FAP5	Uncharacterized protein. (1307 aa)
	A0A2K3CVZ5	Uncharacterized protein. (814 aa)
	A0A2K3CTW3	TPR_REGION domain-containing protein. (561 aa)
	A0A2K3CT72	TPR_REGION domain-containing protein. (1546 aa)
	A0A2K3CSP6	Uncharacterized protein. (649 aa)
	A0A2K3CSL5	TPR_REGION domain-containing protein. (84 aa)
	A0A2K3CS49	Uncharacterized protein. (1846 aa)
	APC3	TPR_REGION domain-containing protein. (1106 aa)
	A0A2K3CRP4	Uncharacterized protein. (810 aa)
	A0A2K3CR03	Uncharacterized protein. (1245 aa)
	A0A2K3CQ16	Uncharacterized protein. (507 aa)
	A0A2K3E1I6	Uncharacterized protein. (1416 aa)
	A0A2K3E1C5	TPR_REGION domain-containing protein. (791 aa)
	A0A2K3E1B6	Peptidylprolyl isomerase. (499 aa)
	A0A2K3E0W1	TPR_REGION domain-containing protein. (664 aa)
	TPR3	TPR_REGION domain-containing protein. (282 aa)
	A0A2K3DY96	Uncharacterized protein. (577 aa)
	A0A2K3DY83	Uncharacterized protein. (1285 aa)
	A0A2K3DXE6	TPR_REGION domain-containing protein. (1004 aa)
	A0A2K3DX83	TPR_REGION domain-containing protein. (665 aa)
	A0A2K3DW27	Uncharacterized protein. (1755 aa)
	SSA15	Uncharacterized protein. (620 aa)
	A0A2K3DVN0	Uncharacterized protein. (622 aa)
	DNJ30	J domain-containing protein. (1741 aa)
	A0A2K3DSY9	Uncharacterized protein. (742 aa)
	A0A2K3DS32	TPR_REGION domain-containing protein. (553 aa)
	A0A2K3DQP9	Uncharacterized protein. (1406 aa)
	A0A2K3DQF2	Uncharacterized protein. (907 aa)
	A0A2K3DP68	Uncharacterized protein. (918 aa)
	A8HQ12_CHLRE	Predicted protein. (330 aa)
	A8HUJ5_CHLRE	Predicted protein. (450 aa)
	MBD1	NAC2 protein. (1385 aa)
	SNAPA1	Alpha-SNAP. (303 aa)
	TPR6	Tetratricopeptide repeat protein, circadian expression. (314 aa)
	A8IAT1_CHLRE	TPR repeat protein. (308 aa)
	A8IHM8_CHLRE	Protein phosphatase 5-like protein. (507 aa)
	A8IPD5_CHLRE	TPR protein. (652 aa)
	FAP259	Flagellar associated protein. (647 aa)
	COPE1	Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. (288 aa)
	A0A2K3D1L6	Uncharacterized protein. (546 aa)
	MBB1	PsbB mRNA maturation factor. (662 aa)
	CGL71	Predicted protein. (258 aa)
	A8JAA0_CHLRE	Predicted protein. (1729 aa)
	A8JBD3_CHLRE	Predicted protein. (227 aa)
	IFT88	Intraflagellar transport particle protein 88. (782 aa)
	ycf3	Photosystem I assembly protein Ycf3; Essential for the assembly of the photosystem I (PSI) complex. May act as a chaperone-like factor to guide the assembly of the PSI subunits. (172 aa)
	Q64FN8_CHLRE	FLU chloroplast, alternative spliced version l-FLP. (385 aa)
	A0A172WYN8	Mac1. (982 aa)
	FAP60	Uncharacterized protein. (1355 aa)
	A0A2K3DIW5	Uncharacterized protein. (1574 aa)
	A0A2K3DIV4	SET domain-containing protein. (723 aa)
	A0A2K3DIU8	SET domain-containing protein. (930 aa)
	A0A2K3DHQ0	TPR_REGION domain-containing protein. (1130 aa)
	PEX5	Peroxisomal targeting signal 1 receptor. (846 aa)
	CYN40	Peptidyl-prolyl cis-trans isomerase, cyclophilin-type. (377 aa)
	DNJ8	Uncharacterized protein. (496 aa)
	A0A2K3E6S7	TPR_REGION domain-containing protein. (1359 aa)
	A0A2K3E6E2	TPR_REGION domain-containing protein. (666 aa)
	TPR4	Uncharacterized protein. (1136 aa)
	A0A2K3E5T5	Peptidylprolyl isomerase. (675 aa)
	A0A2K3E380	TPR_REGION domain-containing protein. (958 aa)
	A0A2K3E2U9	J domain-containing protein. (1710 aa)
	A0A2K3E2E5	TPR_REGION domain-containing protein. (385 aa)
	A0A2K3E1Z8	TPR_REGION domain-containing protein. (360 aa)
	A0A2K3DHN8	Uncharacterized protein. (388 aa)
	A0A2K3DHI0	TPR_REGION domain-containing protein. (860 aa)
	A0A2K3DFP9	TPR_REGION domain-containing protein. (380 aa)
	A0A2K3DES1	Peptidylprolyl isomerase. (603 aa)
	A0A2K3DCS0	TPR_REGION domain-containing protein. (1211 aa)
	A0A2K3DC63	Uncharacterized protein. (1535 aa)
	A0A2K3DBR2	TPR_REGION domain-containing protein. (220 aa)
	A0A2K3DB04	TPR_REGION domain-containing protein. (759 aa)
	A0A2K3DAE4	Uncharacterized protein. (231 aa)
	A0A2K3DA90	TPR_REGION domain-containing protein. (235 aa)
	A0A2K3D9W0	TPR_REGION domain-containing protein. (862 aa)
	A0A2K3D9U2	Uncharacterized protein. (690 aa)
	A0A2K3D8W6	TPR_REGION domain-containing protein. (473 aa)
	A0A2K3D8L9	Uncharacterized protein. (267 aa)
	A0A2K3D798	CS domain-containing protein. (969 aa)
	A0A2K3D747	Uncharacterized protein. (593 aa)
	A0A2K3D721	TPR_REGION domain-containing protein. (355 aa)
	A0A2K3D693	Uncharacterized protein. (715 aa)
	A0A2K3D609	TPR_REGION domain-containing protein. (1446 aa)
	A0A2K3D5T6	Uncharacterized protein. (1516 aa)
	A0A2K3D5I0	Uncharacterized protein. (1295 aa)
	A0A2K3D588	TPR_REGION domain-containing protein. (338 aa)
	A0A2K3D549	Uncharacterized protein. (2535 aa)
	A0A2K3D3K8	Uncharacterized protein. (396 aa)
	A0A2K3D2Q8	TPR_REGION domain-containing protein. (287 aa)
	A0A2K3D2L9	TPR_REGION domain-containing protein. (237 aa)
	FAP31	TPR_REGION domain-containing protein. (730 aa)
	A0A2K3D1T8	Uncharacterized protein. (2330 aa)

Your Current Organism:

Chlamydomonas reinhardtii

NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A172WYN8	A0A2K3CTW3	A0A172WYN8	A0A2K3CTW3	Mac1.	TPR_REGION domain-containing protein.	0.592
A0A172WYN8	A0A2K3CZ15	A0A172WYN8	A0A2K3CZ15	Mac1.	TPR_REGION domain-containing protein.	0.512
A0A2K3CS49	A0A2K3CVZ5	A0A2K3CS49	A0A2K3CVZ5	Uncharacterized protein.	Uncharacterized protein.	0.403
A0A2K3CS49	A0A2K3CZ15	A0A2K3CS49	A0A2K3CZ15	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.512
A0A2K3CT72	A0A2K3CVZ5	A0A2K3CT72	A0A2K3CVZ5	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.403
A0A2K3CT72	A0A2K3CZ15	A0A2K3CT72	A0A2K3CZ15	TPR_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.512
A0A2K3CTW3	A0A172WYN8	A0A2K3CTW3	A0A172WYN8	TPR_REGION domain-containing protein.	Mac1.	0.592
A0A2K3CTW3	A0A2K3CZ15	A0A2K3CTW3	A0A2K3CZ15	TPR_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.512
A0A2K3CTW3	A0A2K3D5T6	A0A2K3CTW3	A0A2K3D5T6	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.592
A0A2K3CTW3	A0A2K3D721	A0A2K3CTW3	A0A2K3D721	TPR_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.592
A0A2K3CTW3	A0A2K3D798	A0A2K3CTW3	A0A2K3D798	TPR_REGION domain-containing protein.	CS domain-containing protein.	0.592
A0A2K3CTW3	A0A2K3DXE6	A0A2K3CTW3	A0A2K3DXE6	TPR_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.592
A0A2K3CTW3	A0A2K3E380	A0A2K3CTW3	A0A2K3E380	TPR_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.592
A0A2K3CTW3	A0A2K3E6S7	A0A2K3CTW3	A0A2K3E6S7	TPR_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.592
A0A2K3CTW3	A8JAA0_CHLRE	A0A2K3CTW3	A8JAA0	TPR_REGION domain-containing protein.	Predicted protein.	0.592
A0A2K3CTW3	BBS4	A0A2K3CTW3	A8IYF1	TPR_REGION domain-containing protein.	Bardet biedl syndrome 4 protein.	0.664
A0A2K3CTW3	MBB1	A0A2K3CTW3	A8J509	TPR_REGION domain-containing protein.	PsbB mRNA maturation factor.	0.592
A0A2K3CTW3	MBD1	A0A2K3CTW3	A8I0I6	TPR_REGION domain-containing protein.	NAC2 protein.	0.592
A0A2K3CTW3	TPR4	A0A2K3CTW3	A0A2K3E698	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.592
A0A2K3CTW3	ycf3	A0A2K3CTW3	O20031	TPR_REGION domain-containing protein.	Photosystem I assembly protein Ycf3; Essential for the assembly of the photosystem I (PSI) complex. May act as a chaperone-like factor to guide the assembly of the PSI subunits.	0.592

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