14 items (Chlamydomonas reinhardtii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	IFT172	WD_REPEATS_REGION domain-containing protein. (1755 aa)
	RSP2	Uncharacterized protein. (738 aa)
	IFT57	Uncharacterized protein. (469 aa)
	DHC1b	Uncharacterized protein. (4333 aa)
	TUE	Uncharacterized protein; Belongs to the tubulin family. (487 aa)
	RSP1	Uncharacterized protein. (814 aa)
	RSP6	Radial spoke protein 6. (459 aa)
	RSP3	Radial spoke protein 3. (516 aa)
	IFT88	Intraflagellar transport particle protein 88. (782 aa)
	FLA10	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (786 aa)
	FLA14	Dynein light chain. (91 aa)
	TCTEX1	Flagellar inner arm dynein light chain Tctex1. (114 aa)
	BLD1	Intraflagellar transport protein IFT52. (454 aa)
	IFT81	IFT81_CH domain-containing protein. (683 aa)

Your Current Organism:

Chlamydomonas reinhardtii

NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BLD1	DHC1b	Q946G4	A0A2K3DLV6	Intraflagellar transport protein IFT52.	Uncharacterized protein.	0.789
BLD1	FLA10	Q946G4	A8JFG3	Intraflagellar transport protein IFT52.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.894
BLD1	FLA14	Q946G4	A8JH45	Intraflagellar transport protein IFT52.	Dynein light chain.	0.737
BLD1	IFT172	Q946G4	A0A2K3CP46	Intraflagellar transport protein IFT52.	WD_REPEATS_REGION domain-containing protein.	0.999
BLD1	IFT57	Q946G4	A0A2K3DCC1	Intraflagellar transport protein IFT52.	Uncharacterized protein.	0.999
BLD1	IFT81	Q946G4	A0A2K3CQG9	Intraflagellar transport protein IFT52.	IFT81_CH domain-containing protein.	0.999
BLD1	IFT88	Q946G4	A8JCJ2	Intraflagellar transport protein IFT52.	Intraflagellar transport particle protein 88.	0.999
BLD1	TUE	Q946G4	A0A2K3DX56	Intraflagellar transport protein IFT52.	Uncharacterized protein; Belongs to the tubulin family.	0.796
DHC1b	BLD1	A0A2K3DLV6	Q946G4	Uncharacterized protein.	Intraflagellar transport protein IFT52.	0.789
DHC1b	FLA10	A0A2K3DLV6	A8JFG3	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.846
DHC1b	FLA14	A0A2K3DLV6	A8JH45	Uncharacterized protein.	Dynein light chain.	0.907
DHC1b	IFT172	A0A2K3DLV6	A0A2K3CP46	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.897
DHC1b	IFT57	A0A2K3DLV6	A0A2K3DCC1	Uncharacterized protein.	Uncharacterized protein.	0.758
DHC1b	IFT81	A0A2K3DLV6	A0A2K3CQG9	Uncharacterized protein.	IFT81_CH domain-containing protein.	0.779
DHC1b	IFT88	A0A2K3DLV6	A8JCJ2	Uncharacterized protein.	Intraflagellar transport particle protein 88.	0.808
DHC1b	RSP3	A0A2K3DLV6	A8J2J7	Uncharacterized protein.	Radial spoke protein 3.	0.520
DHC1b	TCTEX1	A0A2K3DLV6	O64980	Uncharacterized protein.	Flagellar inner arm dynein light chain Tctex1.	0.667
DHC1b	TUE	A0A2K3DLV6	A0A2K3DX56	Uncharacterized protein.	Uncharacterized protein; Belongs to the tubulin family.	0.646
FLA10	BLD1	A8JFG3	Q946G4	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Intraflagellar transport protein IFT52.	0.894
FLA10	DHC1b	A8JFG3	A0A2K3DLV6	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.846

page 1 of 6

Server load: low (34%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About